RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HMGN3Q15651 99 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 C2orf68Q2NKX9 166 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FAM53AQ6NSI3 398 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR52M1Q8NGK5 317 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 TOMM40LQ969M1 308 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GALMQ96C23 342 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 RBM14Q96PK6 669 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ZNF230Q9UIE0 474 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 A0A1W2PPI3 338 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FAM90A9PA6NNJ1 464 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SSX5O60225 188 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR2F2O95006 317 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 CBX5P45973 191 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SRSF7Q16629 238 aaKnown RBP eCLIP14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR1L1Q8NH94 360 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ST6GALNAC5Q9BVH7 336 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GFOD1Q9NXC2 390 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 IGHV3-43A0A0B4J1X8 118 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 TRDCB7Z8K6 153 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SDCBPO00560 298 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 AMY1AP04745 511 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 AMY2AP04746 511 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 CSF1P09603 554 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 IGHV3-43DP0DP04 118 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 IL18Q14116 193 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 Q6ZS49 121 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR56B4Q8NH76 319 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 IL1F10Q8WWZ1 152 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 AKR1E2Q96JD6 320 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SCPEP1Q9HB40 452 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 IFT46Q9NQC8 304 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FABP12A6NFH5 140 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 WIPF1O43516 503 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 LPLP06858 475 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 VDAC2P45880 294 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HTD2P86397 168 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 PYHIN1Q6K0P9 492 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR6Q1Q8NGQ2 317 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR10X1Q8NGY0 326 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FAM110DQ8TAY7 271 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 CAPSLQ8WWF8 208 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 MAFIPQ8WZ33 124 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR2S2Q9NQN1 319 aa14.24□□□□□ -0.13
TNFRSF1A-209ENST00000536717 PRKDCP78527 4128 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SULT1C2O00338 296 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FABP7O15540 132 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 KCNAB3O43448 404 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FBXO24O75426 580 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SNRNP70P08621 437 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SCTP09683 121 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 CD28P10747 220 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 RAB7AP51149 207 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ABCA11PQ4W5N1 156 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ARSJQ5FYB0 599 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 STEAP3Q658P3 488 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 LINC00311Q8N616 119 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 DRAM1Q8N682 238 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 OR4A4PQ8NGN8 299 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ABHD1Q96SE0 405 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 PTTG2Q9NZH5 202 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 JPT1Q9UK76 154 aa14.23□□□□□ -0.13
TNFRSF1A-209ENST00000536717 MEIS3P1A6NDR6 274 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SH2D7A6NKC9 451 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ZNF816Q0VGE8 651 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SPANXN2Q5MJ10 180 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FAM131AQ6UXB0 335 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 C5orf24Q7Z6I8 188 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HOGA1Q86XE5 327 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GVQW1Q8N7I0 195 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 C8orf31Q8N9H6 132 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 BEST4Q8NFU0 473 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GPX8Q8TED1 209 aa14.22□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HSD17B6O14756 317 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SLC31A2O15432 143 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HSPA12AO43301 675 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 PEX14O75381 377 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 RGS11O94810 467 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GSTT2P0CG29 244 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 GSTT2BP0CG30 244 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FAM106CPP0CH98 169 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ZBTB25P24278 435 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 Q3ZCU0 254 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 LYG1Q8N1E2 194 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ZNF439Q8NDP4 499 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 FCAMRQ8WWV6 532 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 SLC23A1Q9UHI7 598 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 ANXA10Q9UJ72 324 aa14.21□□□□□ -0.13
TNFRSF1A-209ENST00000536717 DIRAS3O95661 229 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 DEFA6Q01524 100 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CCDC190Q86UF4 302 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR52L2PQ8NGH6 319 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ST6GALNAC6Q969X2 333 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CITED2Q99967 270 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms