RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 IL36GQ9NZH8 169 aa9.92□□□□□ -0.82
CHRNB1-202ENST00000536404 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
CHRNB1-202ENST00000536404 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
CHRNB1-202ENST00000536404 MED12Q93074 2177 aa9.92□□□□□ -0.82
CHRNB1-202ENST00000536404 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 RBFOX3A6NFN3 312 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 M0R135 149 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 TCF21O43680 179 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 EFNA2O43921 213 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 CLDN17P56750 224 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 PAX5Q02548 391 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 BAXQ07812 192 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 ATP6V1FQ16864 119 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 NCR3LG1Q68D85 454 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 RNF144BQ7Z419 303 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 C1QL2Q7Z5L3 287 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 FAM213BQ8TBF2 198 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 NRGNQ92686 78 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 TOMM40LQ969M1 308 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 ZNF799Q96GE5 643 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 HIPK2Q9H2X6 1198 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 PLEKHF2Q9H8W4 249 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 B4GALT7Q9UBV7 327 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 MTORP42345 2549 aa9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 YLPM1P49750 1951 aaKnown RBP9.91□□□□□ -0.82
CHRNB1-202ENST00000536404 EXPH5Q8NEV8 1989 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 F5H5K5 113 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 CYB5BO43169 146 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 SOX15O60248 233 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 IL18BPO95998 194 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OPN1MWP04001 364 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 HSPB1P04792 205 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 IL6RP08887 468 aaPredicted RBP9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OPN1MW2P0DN77 364 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OPN1MW3P0DN78 364 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 FAHP16930 419 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 VAMP2P63027 116 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 SRSF7Q16629 238 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 PDZD11Q5EBL8 140 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OR2C3Q8N628 320 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 FADS6Q8N9I5 356 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OR4D5Q8NGN0 318 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 OR10G4Q8NGN3 311 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 Q8WTZ3 238 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 ORAOV1Q8WV07 137 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 PIGTQ969N2 578 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 C20orf24Q9BUV8 137 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 AK3Q9UIJ7 227 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 ITPR3Q14573 2671 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 C2CD3Q4AC94 2353 aa9.9□□□□□ -0.82
CHRNB1-202ENST00000536404 NKX6-3A6NJ46 265 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 AHRRA9YTQ3 701 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 DHHO43323 396 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 AMBPP02760 352 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 TRGC2P03986 189 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 PTGDSP41222 190 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 GLIPR1P48060 266 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 UBE2KP61086 200 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 EWSR1Q01844 656 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 MALLQ13021 153 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 ENDOGQ14249 297 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 TMEM176BQ3YBM2 270 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 ACSF3Q4G176 576 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 WIPI1Q5MNZ9 446 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 GFI1BQ5VTD9 330 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 CRIP3Q6Q6R5 217 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 SLC35E3Q7Z769 313 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 ZNF100Q8IYN0 542 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 OR2G3Q8NGZ4 309 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 OR1P1Q8NH06 330 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 MSI2Q96DH6 328 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 BORCS8Q96FH0 119 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 BOD1Q96IK1 185 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 WFDC1Q9HC57 220 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 MSL2Q9HCI7 577 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 SLC7A11Q9UPY5 501 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 ANKHD1Q8IWZ3 2542 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 HRNRQ86YZ3 2850 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 KIAA1549Q9HCM3 1950 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A10PA6NDY2 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A18PA6NE21 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A16PA6NEW6 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A20PA6NIJ5 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A7PA6NKC0 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 GJE1A6NN92 205 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A22PA8MWA6 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A12PA8MX19 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A5PA8MXJ8 464 aa9.89□□□□□ -0.83
CHRNB1-202ENST00000536404 FAM90A23PA8MXZ1 464 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms