RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RAET1LQ5VY80 246 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 VASH2Q86V25 355 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 MED12LQ86YW9 2145 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 CLEC18CQ8NCF0 446 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 C1orf162Q8NEQ5 155 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 KCNG3Q8TAE7 436 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 DAZLQ92904 295 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 CLEC7AQ9BXN2 247 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 MRPL18Q9H0U6 180 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 PLK3Q9H4B4 646 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 SLC25A22Q9H936 323 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 CENPMQ9NSP4 180 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 TMEM38BQ9NVV0 291 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 TAAR3PQ9P1P4 343 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 NAT8Q9UHE5 227 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 LOC102723996A0A087X1L8 192 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 B9A039 149 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 PHF1O43189 567 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 IGKV1D-33P01593 117 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 IGKV1-33P01594 117 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 SERPINE2P07093 398 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 GPX1P07203 203 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 ATP5J2P56134 94 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 SLC17A1Q14916 467 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 BVES-AS1Q5T3Y7 98 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 SP5Q6BEB4 398 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 GLIPR1L1Q6UWM5 242 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 MRPL21Q7Z2W9 205 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 C6orf201Q7Z4U5 140 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 CMTM8Q8IZV2 173 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 FAM58AQ8N1B3 248 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 MUC15Q8N387 334 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 PNKDQ8N490 385 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 CISD2Q8N5K1 135 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 TMEM252Q8N6L7 170 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 OR10V1Q8NGI7 309 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 OR5D14Q8NGL3 314 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 NEU4Q8WWR8 484 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 OR1E3Q8WZA6 343 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 GMPPAQ96IJ6 420 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 ZNF681Q96N22 645 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 GEMIN7Q9H840 131 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 MTHFD2LQ9H903 347 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 WDR54Q9H977 334 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 LYRM2Q9NU23 88 aaPredicted RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 MBNL3Q9NUK0 354 aaKnown RBP3.18□□□□□ -1.9
MCF2-210ENST00000536274 SMPXQ9UHP9 88 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 POLR1DQ9Y2S0 133 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 WDFY4Q6ZS81 3184 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 ADAMTS20P59510 1910 aa3.18□□□□□ -1.9
MCF2-210ENST00000536274 A0A1W2PS18 150 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 H3BUT2 72 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CYR61O00622 381 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 B3GALT2O43825 422 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 C8AP07357 584 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 FAM87AP0C7U9 286 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CD99P14209 185 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 KITLGP21583 273 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CD24P25063 80 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CD70P32970 193 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SSTR5P35346 364 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TCL1AP56279 114 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 PLP1P60201 277 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 UBE2NP61088 152 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 NSDHLQ15738 373 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 HLA-DRB5Q30154 266 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ITPRIPL2Q3MIP1 535 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TMEM196Q5HYL7 178 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 C1orf140Q5VVS0 124 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TPRG1Q6ZUI0 275 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 LINC00173Q6ZV60 143 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TGIF2LYQ8IUE0 185 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SMIM20Q8N5G0 67 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 OR4P4Q8NGL7 312 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 OR1K1Q8NGR3 316 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 FAM216AQ8WUB2 273 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 LRRC61Q9BV99 259 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CISD1Q9NZ45 108 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 MCTS1Q9ULC4 181 aaKnown RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 ARL2-SNX15V9GYD0 113 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CHD7Q9P2D1 2997 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 IGLV3-16A0A075B6K0 115 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 A0A0B4J2E0 115 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 A0A1B0GX12 115 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 FCN1O00602 326 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 TRAF3IP2O43734 574 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 STC2O76061 302 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 SYNGR4O95473 234 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CLDN14O95500 239 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CA2P00918 260 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 IGLV3-27P01718 113 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CD1AP06126 327 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 LIPFP07098 398 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CT45A8P0DMV1 189 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CT45A9P0DMV2 189 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 IAPPP10997 89 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 ZNF17P17021 662 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 CSNK2A2P19784 350 aaPredicted RBP3.17□□□□□ -1.9
MCF2-210ENST00000536274 SFTPDP35247 375 aa3.17□□□□□ -1.9
MCF2-210ENST00000536274 FABP6P51161 128 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms