RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CMTM3Q96MX0 182 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 ZNF714Q96N38 554 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 CMSS1Q9BQ75 279 aaKnown RBP10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 ATG5Q9H1Y0 275 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 METTL8Q9H825 291 aaKnown RBP10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 PLEKHJ1Q9NW61 149 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 EXTL2Q9UBQ6 330 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 CDC42EP3Q9UKI2 254 aa10.41□□□□□ -0.74
RPUSD4-208ENST00000533628 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 CENPVL3A0A0U1RRI6 287 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 A0A1W2PPH5 198 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 MFNGO00587 321 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 NAPSAO96009 420 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 GIPP09681 153 aaPredicted RBP10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 GDNFP39905 211 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 OR56B4Q8NH76 319 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 SLC25A32Q9H2D1 315 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 SIRT7Q9NRC8 400 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 MBNL3Q9NUK0 354 aaKnown RBP10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 AK3Q9UIJ7 227 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 MTORP42345 2549 aa10.4□□□□□ -0.74
RPUSD4-208ENST00000533628 NPIPB11E5RHQ5 1161 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 RNASEK-C17orf49H0YIS7 233 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 C15orf65H3BRN8 121 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 UBE2CO00762 179 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 SCGNO76038 276 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 ELK1P19419 428 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 PRB3Q04118 309 aaPredicted RBP10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 ZNF880Q6PDB4 577 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 SVBPQ8N300 66 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 MRGPRDQ8TDS7 321 aa10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 C7orf50Q9BRJ6 194 aaKnown RBP10.4□□□□□ -0.75
RPUSD4-208ENST00000533628 TRBV6-6A0A0A6YYG2 114 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 KBTBD11-OT1A0A1B0GTJ5 212 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 PRAF2O60831 178 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 IGHV1-8P0DP01 117 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 HIST1H1DP16402 221 aaKnown RBP10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 HNF1AP20823 631 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 RNF212Q495C1 297 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 TRAPPC6BQ86SZ2 158 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 TEX29Q8N6K0 151 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 OR4K15Q8NH41 348 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 CCDC107Q8WV48 283 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 TMEM68Q96MH6 324 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 HDHD3Q9BSH5 251 aaPredicted RBP10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 CALYQ9NYX4 217 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 KIAA2026Q5HYC2 2103 aa10.39□□□□□ -0.75
RPUSD4-208ENST00000533628 TRAV40A0A0B4J280 105 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 HMSDA8MTL9 139 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 SIX6O95475 246 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GNB3P16520 340 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 RCC1P18754 421 aaPredicted RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GLP1RP43220 463 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 RAP2BP61225 183 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 KLRD1Q13241 179 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 ZNF260Q3ZCT1 412 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 CHRFAM7AQ494W8 412 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 BAIAP2L2Q6UXY1 529 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 RBMS3Q6XE24 437 aaKnown RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 LHX4Q969G2 390 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 ZMAT3Q9HA38 289 aaKnown RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 PIPOXQ9P0Z9 390 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 DMRT1Q9Y5R6 373 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 IGHV3OR16-10A0A075B7F0 116 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 A0A0A6YYH2 397 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 A6NJ64 397 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 CRYBA1P05813 215 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 FOLR2P14207 255 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GZMHP20718 246 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 SSTR5P35346 364 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GPX4P36969 197 aaPredicted RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 UBE2NLQ5JXB2 153 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 UTF1Q5T230 341 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 PRAMEF5Q5TYX0 476 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 GSG1LQ6UXU4 331 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 SPAG16Q8N0X2 631 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 PUSL1Q8N0Z8 303 aaKnown RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 SAMD12Q8N8I0 201 aa10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 SOX21Q9Y651 276 aaPredicted RBP10.38□□□□□ -0.75
RPUSD4-208ENST00000533628 IGHV1-69DA0A0B4J2H0 117 aa10.37□□□□□ -0.75
RPUSD4-208ENST00000533628 hCG_1809904A0A1W2PP81 198 aa10.37□□□□□ -0.75
RPUSD4-208ENST00000533628 A0A1W2PPE2 198 aa10.37□□□□□ -0.75
RPUSD4-208ENST00000533628 A0A1W2PR64 198 aa10.37□□□□□ -0.75
RPUSD4-208ENST00000533628 A0A1W2PRV1 198 aa10.37□□□□□ -0.75
RPUSD4-208ENST00000533628 C5orf52A6NGY3 159 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms