RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C16orf82Q7Z2V1 217 aa12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 DICER1Q9UPY3 1922 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 TMEM50BP56557 158 aa12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 CLRN3Q8NCR9 226 aa12.76□□□□□ -0.37
PCDHA9-202ENST00000532602 A0A0G2JMM0 328 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 A0A1W2PPB8 328 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 A0A1W2PRS3 328 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 KIR3DP1A8MWS1 328 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 FOXH1O75593 365 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 EWSR1Q01844 656 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 LAMTOR1Q6IAA8 161 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 B9A039 149 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 IGF2P01344 180 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 LIMS1P48059 325 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 CTXND1A0A1B0GTU2 59 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 FAM74A3Q4VXF1 159 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 TMEM229AB2RXF0 380 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 MIXL1Q9H2W2 232 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 SRD5A3Q9H8P0 318 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 PGA5P0DJD9 388 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 OR2T10Q8NGZ9 312 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 METTL1Q9UBP6 276 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-202ENST00000532602 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 NYNRINQ9P2P1 1898 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 DHRS7CA6NNS2 312 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 OR2H2O95918 312 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 IRF3Q14653 427 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 METTL26Q96S19 204 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 SLC25A33Q9BSK2 321 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 PPIAL4CA0A0B4J2A2 164 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 HELTA6NFD8 242 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 PPIAL4GP0DN37 164 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 RBM14Q96PK6 669 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 NPVFQ9HCQ7 196 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 RCC2Q9P258 522 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 RAXQ9Y2V3 346 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 IGHV3OR16-10A0A075B7F0 116 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 SS18L1O75177 396 aaPredicted RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 DEDDO75618 318 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 LYRM2Q9NU23 88 aaPredicted RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 A0A1W2PP11 408 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 WNT9BO14905 357 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 MELTFP08582 738 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 NUBP1P53384 320 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 EAF1Q96JC9 268 aaPredicted RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 ANK1P16157 1881 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 PHOX2AO14813 284 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 FAM106AQ4KMX7 169 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 LPAR5Q9H1C0 372 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 KLK13Q9UKR3 277 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 V9GYH0 126 aa12.74□□□□□ -0.37
PCDHA9-202ENST00000532602 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 ODAMA1E959 279 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 B4DEV8 164 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 MGPP08493 103 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 RHOVQ96L33 236 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 TIMP4Q99727 224 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 TMEM78Q5T7P6 136 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 MUC15Q8N387 334 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 OR10J6PQ8NGY7 276 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 IDI2-AS1Q9NZ38 188 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 MPDU1O75352 247 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 CCL19Q99731 98 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 SPANXN1Q5VSR9 72 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 Q6ZN92 141 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 ZDBF2Q9HCK1 2354 aa12.73□□□□□ -0.37
PCDHA9-202ENST00000532602 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 PAXXQ9BUH6 204 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 LOC105371242A0A075B767 164 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 BMPR1BO00238 502 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 CD1BP29016 333 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 IGLV3-21P80748 117 aaPredicted RBP12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 OR9G1Q8NH87 305 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 OR4C12Q96R67 309 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 CALYQ9NYX4 217 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 SBF1O95248 1867 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 KCNAB3O43448 404 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 LIPFP07098 398 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 DNM1P46Q6ZS02 220 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 KLF14Q8TD94 323 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms