RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 OR4P4Q8NGL7 312 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 LURAP1Q96LR2 239 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 C1QTNF9BB2RNN3 333 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 C1QTNF9P0C862 333 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 CLDN18P56856 261 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 SNAI3Q3KNW1 292 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 RNASEKQ6P5S7 137 aaKnown RBP9.7□□□□□ -0.86
PTPRK-221ENST00000532331 WFDC3Q8IUB2 231 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 J3QR06 171 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 C10orf113Q5VZT2 155 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
PTPRK-221ENST00000532331 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 IGKV1D-42A0A075B6H8 117 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 K7ENP7 123 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 FCN1O00602 326 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 WDR73Q6P4I2 378 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ST6GALNAC3Q8NDV1 305 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 PRSS3P2Q8NHM4 247 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 OPN4Q9UHM6 478 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 SPTBN2O15020 2390 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ERVH48-1M5A8F1 160 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 SS18L1O75177 396 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 HPRT1P00492 218 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 IGHMP01871 453 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 HBZP02008 142 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ID1P41134 155 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 FLVCR1-AS1Q8TAF5 88 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 OR51B2Q9Y5P1 312 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 IGHV2OR16-5A0A0B4J2B6 119 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 GCM2O75603 506 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ANKRD55Q3KP44 614 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ABHD12Q8N2K0 398 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 CLEC7AQ9BXN2 247 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 METTL1Q9UBP6 276 aaKnown RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 TCF20Q9UGU0 1960 aaKnown RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 TRBV5-5A0A0J9YX44 114 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 J3QKU1 62 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 PLA2G10O15496 165 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 HIST1H3AP68431 136 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ST6GAL2Q96JF0 529 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 DEPPQ9NTK1 212 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 KIAA1324LA8MWY0 1029 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-221ENST00000532331 ISG15P05161 165 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 FABP4P15090 132 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 CXCL3P19876 107 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 TEPPQ6URK8 271 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 UNQ5815/PRO19632Q6UWF5 114 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 MEGF10Q96KG7 1140 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 OR4C12Q96R67 309 aa9.69□□□□□ -0.86
PTPRK-221ENST00000532331 TCAPO15273 167 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 MUC1P15941 1255 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-221ENST00000532331 CEBPDP49716 269 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-221ENST00000532331 PNKDQ8N490 385 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 VSIG4Q9Y279 399 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 ODAMA1E959 279 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 NPIPB13A6NJU9 1138 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 NPIPB4C9JG80 1138 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 RPL30P62888 115 aaKnown RBP9.68□□□□□ -0.86
PTPRK-221ENST00000532331 CALYQ9NYX4 217 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 SPRR3Q9UBC9 169 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 OR2T8A6NH00 312 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 B2MP61769 119 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 ZNF79Q15937 498 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 BSXQ3C1V8 233 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 OR1L6Q8NGR2 347 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM210BQ96KR6 192 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 NPAS1Q99742 590 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A10PA6NDY2 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A18PA6NE21 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A16PA6NEW6 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A20PA6NIJ5 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A8PA6NJQ4 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A7PA6NKC0 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A22PA8MWA6 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A12PA8MX19 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A5PA8MXJ8 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A23PA8MXZ1 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A15PP0C7V4 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A13PP0C7W8 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A14PP0C7W9 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 FAM90A24PP0C7X0 464 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 OR9G1Q8NH87 305 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 AMELYQ99218 206 aa9.68□□□□□ -0.86
PTPRK-221ENST00000532331 RCC2Q9P258 522 aaKnown RBP9.68□□□□□ -0.86
PTPRK-221ENST00000532331 RPL27AP46776 148 aaKnown RBP9.67□□□□□ -0.86
PTPRK-221ENST00000532331 ZNF273Q14593 569 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms