RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SSX7Q7RTT5 188 aa6.76□□□□□ -1.33
CTNND1-230ENST00000532245 CALHM1Q8IU99 346 aa6.76□□□□□ -1.33
CTNND1-230ENST00000532245 GPHA2Q96T91 129 aa6.76□□□□□ -1.33
CTNND1-230ENST00000532245 PLSCR3Q9NRY6 295 aa6.76□□□□□ -1.33
CTNND1-230ENST00000532245 VSIG10L2P0DP72 767 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 SPNP16150 400 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 AKR1C3P42330 323 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 PAFAH1B2P68402 229 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 GAMTQ14353 236 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 SOHLH1Q5JUK2 328 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 SLC25A15Q9Y619 301 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 LY6HO94772 140 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 TOR2AQ5JU69 321 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 C1QTNF12Q5T7M4 302 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM219AQ8IW50 185 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 OR8I2Q8N0Y5 310 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A20PA6NIJ5 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A8PA6NJQ4 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A22PA8MWA6 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A12PA8MX19 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 IGHV1-46P01743 117 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A13PP0C7W8 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 USF1P22415 310 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-230ENST00000532245 SURF2Q15527 256 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-230ENST00000532245 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 CLEC9AQ6UXN8 241 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
CTNND1-230ENST00000532245 ZNF645Q8N7E2 425 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 ZNF485Q8NCK3 441 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 ADAD2Q8NCV1 583 aaKnown RBP6.75□□□□□ -1.33
CTNND1-230ENST00000532245 V9GYS6 101 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 TRBV5-7A0A0A0MS05 114 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 PIN1P1O15428 100 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 WNT5AP41221 380 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 TIGITQ495A1 244 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 OVCH2Q7RTZ1 564 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 LYZL2Q7Z4W2 148 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 RPUSD4Q96CM3 377 aaKnown RBP6.75□□□□□ -1.33
CTNND1-230ENST00000532245 TVP23CQ96ET8 276 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 WBP1Q96G27 269 aa6.75□□□□□ -1.33
CTNND1-230ENST00000532245 LYPD3O95274 346 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 TRAPPC2P0DI81 140 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 TRAPPC2BP0DI82 140 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 M6PRP20645 277 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 DSCR9P59020 149 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 C1QL2Q7Z5L3 287 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PAQR4Q8N4S7 273 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 POC1AQ8NBT0 407 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PTX4Q96A99 478 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 Q96M66 194 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 DPM3Q9P2X0 92 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 JPT1Q9UK76 154 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 NUP210Q8TEM1 1887 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 SERTM2A0A1B0GWG4 89 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PROB1E7EW31 1015 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 CCL3L1P16619 93 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PAX6P26367 422 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 GZMKP49863 264 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 OR2T10Q8NGZ9 312 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 TMEM186Q96B77 213 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 BSCL2Q96G97 398 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 RHOVQ96L33 236 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 WSB1Q9Y6I7 421 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 RPL8P62917 257 aaKnown RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 CXorf66Q5JRM2 361 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 HIST2H3AQ71DI3 136 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 OR2C3Q8N628 320 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 MIXL1Q9H2W2 232 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 OR51I2Q9H344 312 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 IL36RNQ9UBH0 155 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PRELID1Q9Y255 219 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 SPTBN1Q01082 2364 aaKnown RBP6.74□□□□□ -1.33
CTNND1-230ENST00000532245 TRAV40A0A0B4J280 105 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 PPOXP50336 477 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 C1orf100Q5SVJ3 147 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 MAPK1IP1LQ8NDC0 245 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 OR4C12Q96R67 309 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 NIPSNAP3BQ9BS92 247 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 IGKV1D-33P01593 117 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 IGKV1-33P01594 117 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 NPY1RP25929 384 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 C11orf87Q6NUJ2 197 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 MMD2Q8IY49 270 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 CADM3Q8N126 398 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 OR4D10Q8NGI6 311 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 NRIP2Q9BQI9 281 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
CTNND1-230ENST00000532245 ELF5Q9UKW6 265 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms