RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SIGLEC12Q96PQ1 595 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 PCGF1Q9BSM1 259 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 PILRBQ9UKJ0 227 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 TP53TG5Q9Y2B4 290 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 DMRT1Q9Y5R6 373 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 CADP27708 2225 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 REV3LO60673 3130 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 CD55P08174 381 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
NXF1-211ENST00000531709 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 TAF15Q92804 592 aaKnown RBP eCLIP9.66□□□□□ -0.86
NXF1-211ENST00000531709 ARHGAP21Q5T5U3 1957 aa9.66□□□□□ -0.86
NXF1-211ENST00000531709 MDFIC2A0A1B0GVS7 189 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 K7ESF4 209 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 LILRA1O75019 489 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 HOXB1P14653 301 aaPredicted RBP9.65□□□□□ -0.86
NXF1-211ENST00000531709 MEOX1P50221 254 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 FAM3BP58499 235 aaPredicted RBP9.65□□□□□ -0.86
NXF1-211ENST00000531709 LINC00469Q8N7U9 141 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 J3QT63 122 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 NDUFS6O75380 124 aaKnown RBP9.65□□□□□ -0.86
NXF1-211ENST00000531709 MT-CO3P00414 261 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 DEFA4P12838 97 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 PPP1CBP62140 327 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 TMEM42Q69YG0 159 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 CRIP3Q6Q6R5 217 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 OR1L1Q8NH94 360 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 DTD1Q8TEA8 209 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 ABHD14BQ96IU4 210 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 TTTY12Q9BZ98 90 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 CRIM1Q9NZV1 1036 aa9.65□□□□□ -0.86
NXF1-211ENST00000531709 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.87
NXF1-211ENST00000531709 Q6ZRM9 215 aa9.65□□□□□ -0.87
NXF1-211ENST00000531709 TMEM30CPA0ZSE6 113 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A10PA6NDY2 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A18PA6NE21 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A16PA6NEW6 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A20PA6NIJ5 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A22PA8MWA6 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 SPINT2O43291 252 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FCGR3BO75015 233 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 SOD3P08294 240 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 SERF2P84101 59 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 NMSQ5H8A3 153 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
NXF1-211ENST00000531709 SAMD10Q9BYL1 202 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 SERTAD4Q9NUC0 356 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 DECR2Q9NUI1 292 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TREM2Q9NZC2 230 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 USF3Q68DE3 2245 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 LRRC3CA6NJW4 275 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 C11orf94C9JXX5 98 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 GPR12P47775 334 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 ZNF705AQ6ZN79 300 aaPredicted RBP9.64□□□□□ -0.87
NXF1-211ENST00000531709 DRAM1Q8N682 238 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TRIB1Q96RU8 372 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 ARRDC1-AS1Q9H2J1 176 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 HIPK2Q9H2X6 1198 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 PITPNC1Q9UKF7 332 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 PRR14LQ5THK1 2151 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TRAV24A0A0B4J272 114 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 FAM157AC9JC47 383 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 DVL1O14640 695 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TGOLN2O43493 480 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 MBP02144 154 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 KITLGP21583 273 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 ACOT6Q3I5F7 207 aaPredicted RBP9.64□□□□□ -0.87
NXF1-211ENST00000531709 OR2T10Q8NGZ9 312 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 TMEM18Q96B42 140 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 PLEKHA3Q9HB20 300 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 MSL2Q9HCI7 577 aa9.64□□□□□ -0.87
NXF1-211ENST00000531709 SPINK4O60575 86 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 ZG16O60844 167 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 HAND1O96004 215 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 TFF1P04155 84 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
NXF1-211ENST00000531709 SCCPDHQ8NBX0 429 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 LYPD6BQ8NI32 183 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 SLC25A40Q8TBP6 338 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 OR5P3Q8WZ94 311 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
NXF1-211ENST00000531709 RIF1Q5UIP0 2472 aaKnown RBP9.63□□□□□ -0.87
NXF1-211ENST00000531709 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 AGFG2O95081 481 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 PAX6P26367 422 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 CCL11P51671 97 aa9.63□□□□□ -0.87
NXF1-211ENST00000531709 CTAG1AP78358 180 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms