RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZNF878C9JN71 531 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 ISLRO14498 428 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 CD5P06127 495 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 CD28P10747 220 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 CBR1P16152 277 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MARCKSL1P49006 195 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 INPP1P49441 399 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MP68P56378 58 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 IFITM2Q01629 132 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 ELOCQ15369 112 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 ALX1Q15699 326 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 LY6EQ16553 131 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 KRTAP13-2Q52LG2 175 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 TMEM215Q68D42 235 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 IGFL1Q6UW32 110 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 Q6ZRU5 148 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 ZNF550Q7Z398 422 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 SMIM15Q7Z3B0 74 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 TAC4Q86UU9 113 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 DOLPP1Q86YN1 238 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MIR7-3HGQ8N6C7 128 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 OR2M3Q8NG83 312 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 OR51D1Q8NGF3 324 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 OR8A1Q8NGG7 326 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 SLC35G5Q96KT7 338 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 OR7D2Q96RA2 312 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MS4A8Q9BY19 250 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 TXNIPQ9H3M7 391 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 LINC00574Q9H8X3 128 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MARCOQ9UEW3 520 aaPredicted RBP2.53□□□□□ -2
C11orf88-204ENST00000529661 DOCK8Q8NF50 2099 aa2.53□□□□□ -2.01
C11orf88-204ENST00000529661 PCM1Q15154 2024 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 DOCK3Q8IZD9 2030 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 KIF26AQ9ULI4 1882 aaPredicted RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 A0A087WUJ7 227 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 PQLC2LA1A4F0 135 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 C5orf49A4QMS7 147 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 GOLGA6L4A6NEF3 574 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 F5H5P2 479 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 KLRC4O43908 158 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 KCNK2O95069 426 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 CD79AP11912 226 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 CTSEP14091 401 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 OR1E2P47887 323 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 REG1BP48304 166 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 CDK9P50750 372 aaKnown RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 TMEM33P57088 247 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 RAB2AP61019 212 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 HIST1H3AP68431 136 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 H3F3AP84243 136 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 FABP5Q01469 135 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 BTN1A1Q13410 526 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 MOGQ16653 247 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 ACOT6Q3I5F7 207 aaPredicted RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 LIN52Q52LA3 116 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 LCN8Q6JVE9 175 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 HIST2H3AQ71DI3 136 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 FA2HQ7L5A8 372 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 FAM19A3Q7Z5A8 133 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 TBC1D19Q8N5T2 526 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF676Q8N7Q3 588 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 OR5H2Q8NGV7 314 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 KLF14Q8TD94 323 aaPredicted RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 BTF3L4Q96K17 158 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 OR52E6Q96RD3 313 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 PHB2Q99623 299 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF2Q9BSG1 426 aaPredicted RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF436Q9C0F3 470 aaPredicted RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 EIF5A2Q9GZV4 153 aaKnown RBP2.52□□□□□ -2.01
C11orf88-204ENST00000529661 TRABDQ9H4I3 376 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 TAC3Q9UHF0 121 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 SMPXQ9UHP9 88 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 LINC00527Q9UJ94 153 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 HDGFL3Q9Y3E1 203 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 SCN1AP35498 2009 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 NUP205Q92621 2012 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 BRWD3Q6RI45 1802 aa2.52□□□□□ -2.01
C11orf88-204ENST00000529661 CHD5Q8TDI0 1954 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 C16orf90A8MZG2 172 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 DISC1C4P0D8 188 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 K7EM74 188 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 STK16O75716 305 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 CDRT1O95170 752 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 REG1AP05451 166 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 MPIP34949 423 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 MPV17P39210 176 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 GZMMP51124 257 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 HLA-DRB3P79483 266 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 ATP5G2Q06055 141 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 MESTQ5EB52 335 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 ACSBG2Q5FVE4 666 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF678Q5SXM1 525 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 FAM78BQ5VT40 261 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 GLT6D1Q7Z4J2 308 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 OR4X1Q8NH49 305 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 RMI2Q96E14 147 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms