RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 RTN4IP1Q8WWV3 396 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 TAF15Q92804 592 aaKnown RBP eCLIP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 MRGPRFQ96AM1 343 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 SSX3Q99909 188 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 ABHD14AQ9BUJ0 271 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 TINAGL1Q9GZM7 467 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 PTTG2Q9NZH5 202 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 RABL2AQ9UBK7 228 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 OR2W1Q9Y3N9 320 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 NF1P21359 2839 aa8.65□□□□□ -1.03
NEDD8-205ENST00000527046 ZFHX3Q15911 3703 aa8.65□□□□□ -1.03
NEDD8-205ENST00000527046 IGHV1-3A0A0C4DH29 117 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 OOSP1A8MZH6 123 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CLDN34H7C241 214 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 RBBP9O75884 186 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 RGS11O94810 467 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CD3DP04234 171 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 FBP1P09467 338 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 OR8U9P0C7N5 309 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CT45A6P0DMU7 189 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CT45A5P0DMU8 189 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CT45A7P0DMV0 189 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 OR5H8P0DN80 308 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CD24P25063 80 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 FCGR2CP31995 323 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 S100A5P33763 92 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 RCVRNP35243 200 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 HRH1P35367 487 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 REG1BP48304 166 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 BRWD1-AS2P59051 145 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
NEDD8-205ENST00000527046 EBI3Q14213 229 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 FAM131AQ6UXB0 335 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 LINC00299Q6ZSB3 139 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 LYG1Q8N1E2 194 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 OR2AK2Q8NG84 335 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 OR8U1Q8NH10 309 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 C15orf40Q8WUR7 153 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 FCAMRQ8WWV6 532 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 RITA1Q96K30 269 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 THAP7Q9BT49 309 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-205ENST00000527046 CHIAQ9BZP6 476 aa8.64□□□□□ -1.03
NEDD8-205ENST00000527046 A0A0A6YYJ9 748 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 A6NDX4 124 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 J3QRK9 145 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 M0QYG6 137 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 HSD17B6O14756 317 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 TIMM23O14925 209 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 HSPA12AO43301 675 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 CHST1O43916 411 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 GAPDHP04406 335 aaKnown RBP8.63□□□□□ -1.03
NEDD8-205ENST00000527046 AADACP22760 399 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 UBA52P62987 128 aaKnown RBP8.63□□□□□ -1.03
NEDD8-205ENST00000527046 SSBP1Q04837 148 aaKnown RBP8.63□□□□□ -1.03
NEDD8-205ENST00000527046 BAMBIQ13145 260 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 PLA1AQ53H76 456 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 VAX1Q5SQQ9 334 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 LHFPL1Q86WI0 220 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 DRAM1Q8N682 238 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 OR10X1Q8NGY0 326 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 CREB3L1Q96BA8 519 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 IFT46Q9NQC8 304 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 NECAP2Q9NVZ3 263 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 SDHAF2Q9NX18 166 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF107Q9UII5 783 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-205ENST00000527046 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
NEDD8-205ENST00000527046 OR5H14A6NHG9 310 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 H3BUX3 64 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 RAB29O14966 203 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 PPYP01298 95 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 AMY1AP04745 511 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 AMY2AP04746 511 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 GNRHRP30968 328 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 RAB7AP51149 207 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 RPL30P62888 115 aaKnown RBP8.62□□□□□ -1.03
NEDD8-205ENST00000527046 RELBQ01201 579 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 KLF9Q13886 244 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-205ENST00000527046 LRRC75BQ2VPJ9 315 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 FAAP20Q6NZ36 180 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 THNSL2Q86YJ6 484 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 TMEM86BQ8N661 226 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 Q8N6K4 173 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF383Q8NA42 475 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 OR5AN1Q8NGI8 311 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF418Q8TF45 676 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-205ENST00000527046 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 DDB2Q92466 427 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 TOMM40LQ969M1 308 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 RPEQ96AT9 228 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 MOB3AQ96BX8 217 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 GPHA2Q96T91 129 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms