RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 EXOC1LA0A1B0GW35 172 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 A0A1B0GX12 115 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SLC22A20A6NK97 555 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FAM159BA6NKW6 160 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 M0R233 179 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SLC17A2O00624 439 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ERI3O43414 337 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 FAM189A1O60320 539 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 HLA-AP01891 365 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 TYMSP04818 313 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 CRYGDP07320 174 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 OR5G3P0C626 314 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR5AC1P0C628 307 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 PSG2P11465 335 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FCARP24071 287 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 PRTN3P24158 256 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 CRHBPP24387 322 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 NFYBP25208 207 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 HTR1EP28566 365 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 XCR1P46094 333 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 NUMBP49757 651 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 DAP3P51398 398 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 ATP1B3P54709 279 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FOXA1P55317 472 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 PIGPP57054 158 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 RAB38P57729 211 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 TAS2R30P59541 319 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 TIMM10P62072 90 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SELENOWP63302 87 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 BTN3A2P78410 334 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 PSG4Q00888 419 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FABP5Q01469 135 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SPA17Q15506 151 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SYPL1Q16563 259 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 RPEL1Q2QD12 228 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 LRRC75BQ2VPJ9 315 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SLC25A52Q3SY17 297 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 TDRG1Q3Y452 100 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 TMEM255AQ5JRV8 349 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ACTL10Q5JWF8 245 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 C22orf42Q6IC83 251 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 RPL22L1Q6P5R6 122 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 Q6ZT83 130 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FAM19A1Q7Z5A9 133 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 APRG1Q8IVJ8 170 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR8I2Q8N0Y5 310 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 LRRC25Q8N386 305 aaPredicted RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 PNKDQ8N490 385 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FER1L6-AS1Q8NA97 138 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 LINC00301Q8NCQ3 95 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR4K5Q8NGD3 323 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR10G4Q8NGN3 311 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR6N2Q8NGY6 317 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR2T27Q8NH04 317 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR4X1Q8NH49 305 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR5W2Q8NH69 310 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 FNDC9Q8TBE3 224 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ZNF418Q8TF45 676 aaPredicted RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 RCN3Q96D15 328 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SMIM19Q96E16 107 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 CENPNQ96H22 339 aaPredicted RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 C9orf85Q96MD7 179 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ZNF488Q96MN9 340 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 KCTD7Q96MP8 289 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OXGR1Q96P68 337 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 KIR2DL4Q99706 377 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 NRTNQ99748 197 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 EFCAB11Q9BUY7 163 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 TAPBPLQ9BX59 468 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 PECRQ9BY49 303 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 LPAR5Q9H1C0 372 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 EXOSC3Q9NQT5 275 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 GPATCH2LQ9NWQ4 482 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 OR5AC2Q9NZP5 309 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 NAT8Q9UHE5 227 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 NTNG1Q9Y2I2 539 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 AK6Q9Y3D8 172 aaKnown RBP2.63□□□□□ -1.99
CD44-217ENST00000525348 OR51B2Q9Y5P1 312 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 WSB1Q9Y6I7 421 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 THSD7BQ9C0I4 1608 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ITGB4P16144 1822 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 ADAMTS7Q9UKP4 1686 aa2.63□□□□□ -1.99
CD44-217ENST00000525348 IGLV8-61A0A075B6I0 122 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 A0A0A6YYD5 115 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 KIR2DS1A0A191URI9 304 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 PNMA8CA0A1B0GUJ8 204 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 A0A1B0GW55 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 C7orf66A4D0T2 115 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ARL5CA6NH57 179 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR5B21A6NL26 309 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 IFITM5A6NNB3 132 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF705EA8MWA4 302 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 F5H5K5 113 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 H7BYZ3 331 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 SULT2B1O00204 365 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DCTN6O00399 190 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms