RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 NHLH2Q02577 135 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 CR1LQ2VPA4 569 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 OR2C3Q8N628 320 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 CCL17Q92583 94 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 GAFA1Q96PS6 74 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 PRORYQ9H606 182 aa12.7□□□□□ -0.38
BEST1-204ENST00000524926 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 PKDREJQ9NTG1 2253 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
BEST1-204ENST00000524926 MFSD2BA6NFX1 497 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 FAM24AA6NFZ4 105 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 IGHV3-7P01780 117 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 LPAR6P43657 344 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 RPL30P62888 115 aaKnown RBP12.69□□□□□ -0.38
BEST1-204ENST00000524926 CATR1Q13166 79 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 MORN2Q502X0 79 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 FAM209AQ5JX71 171 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 ZNF788Q6ZQV5 615 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 Q6ZRM9 215 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 RNF141Q8WVD5 230 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 EDARADDQ8WWZ3 215 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
BEST1-204ENST00000524926 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 RAI1Q7Z5J4 1906 aaPredicted RBP12.69□□□□□ -0.38
BEST1-204ENST00000524926 TMPRSS2O15393 492 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 CHST1O43916 411 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 RAMP3O60896 148 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 IGKV1-5P01602 117 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 SFTPCP11686 197 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 TEX36Q5VZQ5 186 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 FGFRL1Q8N441 504 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 AGMATQ9BSE5 352 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 CACNG5Q9UF02 275 aa12.69□□□□□ -0.38
BEST1-204ENST00000524926 PIEZO1Q92508 2521 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 FBXO24O75426 580 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 CLDN1O95832 211 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 PLAUP00749 431 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 APOBEC3AP31941 199 aaPredicted RBP12.68□□□□□ -0.38
BEST1-204ENST00000524926 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
BEST1-204ENST00000524926 CDSNQ15517 529 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 Q3ZCU0 254 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 EIF5AL1Q6IS14 154 aaKnown RBP12.68□□□□□ -0.38
BEST1-204ENST00000524926 MS4A5Q9H3V2 200 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 TRGV10A0A0A0MS01 117 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 TRAV38-1A0A0B4J264 116 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 B8ZZF3 427 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 PITX3O75364 302 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
BEST1-204ENST00000524926 SLC25A6P12236 298 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
BEST1-204ENST00000524926 C1orf87Q8N0U7 546 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 SPAG16Q8N0X2 631 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 FAM234AQ9H0X4 552 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 C11orf1Q9H5F2 150 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 SESN1Q9Y6P5 492 aa12.68□□□□□ -0.38
BEST1-204ENST00000524926 YPEL1O60688 119 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 CLDN14O95500 239 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 GPR12P47775 334 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 LOXL3P58215 753 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 LINC00205P59089 165 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
BEST1-204ENST00000524926 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 NCOR1P1Q9H4R4 102 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
BEST1-204ENST00000524926 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
BEST1-204ENST00000524926 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 BORCS7-ASMTA0A0B4J1R7 106 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 F2RL2O00254 374 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 SIGLEC5O15389 551 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 KRASP01116 189 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 NDUFB7P17568 137 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 MSMO1Q15800 293 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 SLC25A31Q9H0C2 315 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 WFDC1Q9HC57 220 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 KCNJ16Q9NPI9 418 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 LYRM2Q9NU23 88 aaPredicted RBP12.67□□□□□ -0.38
BEST1-204ENST00000524926 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 RNF115Q9Y4L5 304 aa12.67□□□□□ -0.38
BEST1-204ENST00000524926 PPIAL4EA0A075B759 164 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 KBTBD11-OT1A0A1B0GTJ5 212 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 IGSF23A1L1A6 192 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 C17orf98A8MV24 154 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 PPIAL4DF5H284 164 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 TMEM178BH3BS89 294 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 LGALS8O00214 317 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 TMEM50AO95807 157 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 PPIAL4FP0DN26 164 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 CGB3P0DN86 165 aa12.66□□□□□ -0.38
BEST1-204ENST00000524926 CGB7P0DN87 165 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms