RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	ZP3	P21754	424 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	GRN	P28799	593 aa	Known RBP	13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	HTD2	P86397	168 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	UBAC2	Q8NBM4	344 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	ZBTB34	Q8NCN2	500 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746		Q8TCH9	128 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	LSM10	Q969L4	123 aa	Known RBP	13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	LYRM2	Q9NU23	88 aa	Predicted RBP	13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	RNF115	Q9Y4L5	304 aa		13.85	□□□□□ -0.19
FAM49B-223	ENST00000522746	C17orf100	A8MU93	164 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	SLC25A6	P12236	298 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	GZMH	P20718	246 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	LPAR6	P43657	344 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	VAMP2	P63027	116 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	CR1L	Q2VPA4	569 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	SSX8	Q7RTT4	187 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	ODF3L1	Q8IXM7	274 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	ZNF561	Q8N587	486 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	ST6GALNAC3	Q8NDV1	305 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	NEUROG1	Q92886	237 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	LPAR3	Q9UBY5	353 aa		13.84	□□□□□ -0.19
FAM49B-223	ENST00000522746	PIGBOS1	A0A0B4J2F0	54 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746		B8ZZF3	427 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	SCO1	O75880	301 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	GYPA	P02724	150 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	ADH4	P08319	380 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	OMG	P23515	440 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	CASP6	P55212	293 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	LINC00205	P59089	165 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	SDSL	Q96GA7	329 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	GAFA1	Q96PS6	74 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	CCL13	Q99616	98 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	AGMAT	Q9BSE5	352 aa		13.83	□□□□□ -0.19
FAM49B-223	ENST00000522746	SHISA9	B4DS77	424 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	WRB	O00258	174 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	IGHV3-7	P01780	117 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	PAX9	P55771	341 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	BRWD1-AS2	P59051	145 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	MST1L	Q2TV78	715 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	EIF5AL1	Q6IS14	154 aa	Known RBP	13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	TMEM252	Q8N6L7	170 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	KDF1	Q8NAX2	398 aa	Predicted RBP	13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	ARV1	Q9H2C2	271 aa		13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	DIDO1	Q9BTC0	2240 aa	Known RBP	13.83	□□□□□ -0.2
FAM49B-223	ENST00000522746	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	C17orf98	A8MV24	154 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	TLE1	Q04724	770 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	TUSC1	Q2TAM9	212 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746		Q3ZCU0	254 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	MORN2	Q502X0	79 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	ZNF295-AS1	Q8N0V1	137 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	FGFRL1	Q8N441	504 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	FAM216B	Q8N7L0	139 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	TCTEX1D2	Q8WW35	142 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	C14orf79	Q96F83	325 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	GNG12	Q9UBI6	72 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	CD55	P08174	381 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	IRF2	P14316	349 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	SULT1A2	P50226	295 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	CLINT1	Q14677	625 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	NCMAP	Q5T1S8	102 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	UTF1	Q5T230	341 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	STPG2	Q8N412	459 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	MARC2	Q969Z3	335 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	NARFL	Q9H6Q4	476 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	NGB	Q9NPG2	151 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	CALY	Q9NYX4	217 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	JPT1	Q9UK76	154 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	USF3	Q68DE3	2245 aa		13.82	□□□□□ -0.2
FAM49B-223	ENST00000522746	LINC00473	A8K010	186 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746		E7EQL1	145 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	MED6	O75586	246 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	CST7	O76096	145 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	CLDN1	O95832	211 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	MMP9	P14780	707 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	TNFRSF1A	P19438	455 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	LOXL3	P58215	753 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	ADORA2A-AS1	P86434	159 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	CATR1	Q13166	79 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	SMIM8	Q96KF7	97 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	DIRC2	Q96SL1	478 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	GINS3	Q9BRX5	216 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	SLC25A31	Q9H0C2	315 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	OR6C3	Q9NZP0	311 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	DSCAML1	Q8TD84	2053 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	KRBOX1	C9JBD0	128 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746		H3BP45	60 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	F2RL2	O00254	374 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	S1PR2	O95136	353 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	CGB3	P0DN86	165 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	CGB7	P0DN87	165 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	G6PC	P35575	357 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	MSMO1	Q15800	293 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	C17orf58	Q2M2W7	97 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	PXDC1	Q5TGL8	231 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	TEX36	Q5VZQ5	186 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms