RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 DNAJC13O75165 2243 aa8.69□□□□□ -1.02
PDGFRB-207ENST00000520579 FREM2Q5SZK8 3169 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SRSF10O75494 262 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 HBE1P02100 147 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 GAB4Q2WGN9 574 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 MRPL21Q7Z2W9 205 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 ARHGEF39Q8N4T4 335 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 OR10V1Q8NGI7 309 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 OR5D13Q8NGL4 314 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 DPF1Q92782 380 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 MTCH1Q9NZJ7 389 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 ABCA7Q8IZY2 2146 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 DXOO77932 396 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 ISG15P05161 165 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SERPINE2P07093 398 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF17P17021 662 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CD1BP29016 333 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 C9orf40Q8IXQ3 194 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 WNT10AQ9GZT5 417 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SIVA1O15304 175 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 MPPED1O15442 326 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 PAGE4O60829 102 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CLDN1O95832 211 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CA3P07451 260 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 SCTP09683 121 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CBLN1P23435 193 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 FABP6P51161 128 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CNN1P51911 297 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 FUT7Q11130 342 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 TMEM196Q5HYL7 178 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 GPR35Q9HC97 309 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
PDGFRB-207ENST00000520579 HS3ST1O14792 307 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 RAMP3O60896 148 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 MT-ATP6P00846 226 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF788Q6ZQV5 615 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 SLC25A26Q70HW3 274 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 DOK3Q7L591 496 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 CCDC71LQ8N9Z2 235 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 RDH5Q92781 318 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 FAM131CQ96AQ9 280 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 MSI2Q96DH6 328 aaKnown RBP8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 C20orf144Q9BQM9 153 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 MANBALQ9NQG1 85 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 USF3Q68DE3 2245 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 IGHV5-51A0A0C4DH38 117 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 PPYP01298 95 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 IGHG1P01857 330 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 IL36RNQ9UBH0 155 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 ROS1P08922 2347 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 HSPB2A8KAH6 182 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 F2Z2F3 143 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 EN2P19622 333 aaPredicted RBP8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 NTSR1P30989 418 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 TCL1AP56279 114 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 HSPB2Q16082 182 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 DEFB133Q30KQ1 61 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 SARAFQ96BY9 339 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 LYZL4Q96KX0 146 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 CACNG5Q9UF02 275 aa8.67□□□□□ -1.02
PDGFRB-207ENST00000520579 TNFP01375 233 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 GYPAP02724 150 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 PLCXD3Q63HM9 321 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 OR4S2Q8NH73 311 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 PARLQ9H300 379 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 NUP210LQ5VU65 1888 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 CLEC18AA5D8T8 446 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 OR2T8A6NH00 312 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 H0Y8G0 127 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 CCL2P13500 99 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 MALLQ13021 153 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 CLEC18CQ8NCF0 446 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 LMX1AQ8TE12 382 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 TP73-AS1Q9UF72 201 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 A0A087WWC5 75 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 IGKV1D-13A0A0B4J2D9 117 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 CD300LBA8K4G0 201 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 PITX3O75364 302 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 IGKV1-13P0DP09 117 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms