RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 OR5G3P0C626 314 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 BPIFB3P59826 476 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 RNPS1Q15287 305 aaKnown RBP7.3□□□□□ -1.24
PCM1-212ENST00000519253 LYZL4Q96KX0 146 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 KLHDC3Q9BQ90 382 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 CLN8Q9UBY8 286 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 SSUH2Q9Y2M2 353 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 HS3ST3B1Q9Y662 390 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 SCN2AQ99250 2005 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 hCG_38984A0A1B0GV85 526 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 A0A1W2PR80 420 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 OOEPA6NGQ2 149 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 SPINK4O60575 86 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 ATG101Q9BSB4 218 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 SMOC1Q9H4F8 434 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 GLRX2Q9NS18 164 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 TECRQ9NZ01 308 aaKnown RBP7.3□□□□□ -1.24
PCM1-212ENST00000519253 FREM3P0C091 2139 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 MTCL1Q9Y4B5 1905 aaKnown RBP7.3□□□□□ -1.24
PCM1-212ENST00000519253 TRBV9A0A0B4J1U6 114 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 CER1O95813 267 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 CCL2P13500 99 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 KIR2DS2P43631 304 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 NUBP1P53384 320 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
PCM1-212ENST00000519253 C1orf147Q96MC9 270 aaPredicted RBP7.3□□□□□ -1.24
PCM1-212ENST00000519253 IGHV3-64DA0A0J9YX35 117 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 MKRN2OSH3BPM6 223 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CHEK1O14757 476 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 TNFSF4P23510 183 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 ACSF3Q4G176 576 aaPredicted RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 SPATA46Q5T0L3 261 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CNEP1R1Q8N9A8 125 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 RBM14Q96PK6 669 aaKnown RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 FAM173AQ9BQD7 235 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 HELTA6NFD8 242 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 NPBWR2P48146 333 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 PMCHL1Q16048 86 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 SPSB3Q6PJ21 355 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 SPEM1Q8N4L4 309 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 PKIBQ9C010 78 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 FAM186AA6NE01 2351 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 IGLV3-32A0A0A0MS00 114 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 C2CD4DB7Z1M9 353 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 UCP2P55851 309 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 FOXL2P58012 376 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 IFI44Q8TCB0 444 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 FAM131CQ96AQ9 280 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 POM121L2Q96KW2 1035 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 QTRT1Q9BXR0 403 aaKnown RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 PLXNA4Q9HCM2 1894 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CT45A6P0DMU7 189 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CT45A5P0DMU8 189 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CT45A7P0DMV0 189 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 TRA2AQ13595 282 aaKnown RBP eCLIP7.29□□□□□ -1.244e-7■■■■□ 21.6
PCM1-212ENST00000519253 CT45A1Q5HYN5 189 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 OR2Y1Q8NGV0 311 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 CT45A3Q8NHU0 189 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 MIEN1Q9BRT3 115 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 TP53BP1Q12888 1972 aaPredicted RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 SYNGR3O43761 229 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 HLA-DQA1P01909 254 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 GUSBP11Q6P575 273 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 RTN4RL2Q86UN3 420 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 RNF2Q99496 336 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 WNT5BQ9H1J7 359 aa7.29□□□□□ -1.24
PCM1-212ENST00000519253 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
PCM1-212ENST00000519253 ZXDAP98168 799 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 SPINK9Q5DT21 86 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 RFESDQ8TAC1 157 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 SFRP2Q96HF1 295 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 COMMD5Q9GZQ3 224 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 DLL3Q9NYJ7 618 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 RPH3ALQ9UNE2 315 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 TRAV39A0A0B4J263 110 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 RAB29O14966 203 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 GALR2O43603 387 aaPredicted RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 COX5BP10606 129 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 ERHP84090 104 aaKnown RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 IZUMO4Q1ZYL8 232 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 C6orf15Q6UXA7 325 aaPredicted RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 IL19Q9UHD0 177 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 CLDN16Q9Y5I7 305 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 WIPF3A6NGB9 483 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 SRSF7Q16629 238 aaKnown RBP eCLIP7.28□□□□□ -1.241e-8■■□□□ 11.6
PCM1-212ENST00000519253 LINC00696Q6ZRV3 163 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 WDFY1Q8IWB7 410 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 SCGB2A1O75556 95 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 USF1P22415 310 aaPredicted RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 ZNF718Q3SXZ3 478 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 RNF144BQ7Z419 303 aa7.28□□□□□ -1.24
PCM1-212ENST00000519253 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 CPEB3Q8NE35 698 aaKnown RBP7.28□□□□□ -1.24
PCM1-212ENST00000519253 OR51G1Q8NGK1 321 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms