RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RNF151Q2KHN1 245 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 SPSB3Q6PJ21 355 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 SLC24A4Q8NFF2 622 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 HSPB9Q9BQS6 159 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 TMEM204Q9BSN7 226 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 FAM234AQ9H0X4 552 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 MKRN2OSH3BPM6 223 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 J3QT63 122 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 CCL3P10147 92 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 CA6P23280 308 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 MPLP40238 635 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 RND2P52198 227 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
CPNE3-203ENST00000517490 SPEM2Q0P670 501 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF525Q8N782 197 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 C22orf15Q8WYQ4 148 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 DAZAP1Q96EP5 407 aaKnown RBP5.72□□□□□ -1.49
CPNE3-203ENST00000517490 OR6C3Q9NZP0 311 aa5.72□□□□□ -1.49
CPNE3-203ENST00000517490 IGLV3-32A0A0A0MS00 114 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 EREGO14944 169 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 TIMM8AO60220 97 aaPredicted RBP5.71□□□□□ -1.49
CPNE3-203ENST00000517490 CXorf1O96002 111 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 MAS1LP35410 378 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 RPL23P62829 140 aaKnown RBP5.71□□□□□ -1.49
CPNE3-203ENST00000517490 TNFRSF9Q07011 255 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 CT83Q5H943 113 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 OR4C5Q8NGB2 326 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 STARD4Q96DR4 205 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 ATG101Q9BSB4 218 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 SPXQ9BT56 116 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 PNRC2Q9NPJ4 139 aaKnown RBP5.71□□□□□ -1.49
CPNE3-203ENST00000517490 SLC45A2Q9UMX9 530 aa5.71□□□□□ -1.49
CPNE3-203ENST00000517490 hCG_38984A0A1B0GV85 526 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 C2CD4DB7Z1M9 353 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 DIRC3C9JPN6 131 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SYNGR3O43761 229 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 NDUFB4O95168 129 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SRFP11831 508 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 BMP5P22003 454 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 NPBWR2P48146 333 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 IL11RAQ14626 422 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 DCAF12Q5T6F0 453 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 RIPPLY2Q5TAB7 128 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 MISP3Q96FF7 219 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 PRDM14Q9GZV8 571 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SMOC1Q9H4F8 434 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 KIAA1671Q9BY89 1806 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 OR7C2O60412 319 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 MPDU1O75352 247 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 MT-ND6P03923 174 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 LINC00271P0C7V0 271 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 BRS3P32247 399 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 MFAP4P55083 255 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 C9orf50Q5SZB4 431 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 LYPD6Q86Y78 171 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 MAFAQ8NHW3 353 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 S1PR3Q99500 378 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 VPS25Q9BRG1 176 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF552Q9H707 407 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 UBTD1Q9HAC8 227 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 CLN8Q9UBY8 286 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SNURFLB1AK76 121 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 PPIHO43447 177 aaKnown RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 ENSAO43768 121 aaKnown RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF253O75346 499 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 STAG3L3P0CL85 134 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 CCL2P13500 99 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 G6PCP35575 357 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 EDDM3AQ14507 147 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 STUMQ69YW2 141 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 LRP11Q86VZ4 500 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 ZCCHC14Q8WYQ9 949 aaKnown RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 WDYHV1Q96HA8 205 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM68Q96MH6 324 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 WNT5BQ9H1J7 359 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 WDR54Q9H977 334 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SH2D2AQ9NP31 389 aa5.71□□□□□ -1.5
CPNE3-203ENST00000517490 AURKAIP1Q9NWT8 199 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-203ENST00000517490 SIAH2O43255 324 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TCF21O43680 179 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TOX4O94842 621 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 CD82P27701 267 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 IER3P46695 156 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 P2RY6Q15077 328 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SRSF7Q16629 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TRAT1Q6PIZ9 186 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 FGFRL1Q8N441 504 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 DUSP15Q9H1R2 295 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 A0A1W2PR80 420 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SNRPCP09234 159 aaKnown RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ARG2P78540 354 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 KHDC1LQ5JSQ8 128 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 GUSBP11Q6P575 273 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 C11orf42Q8N5U0 333 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 IFI44Q8TCB0 444 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 RNASEH2CQ8TDP1 164 aaKnown RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM171Q8WVE6 324 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 UBE2ZQ9H832 354 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 MSL2Q9HCI7 577 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms