RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GLYATQ6IB77 296 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 SGPP2Q8IWX5 399 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 ANKRD29Q8N6D5 301 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 TMEM75Q8N9X5 138 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 LY6G5BQ8NDX9 201 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 OR5K1Q8NHB7 308 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 CANT1Q8WVQ1 401 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 GPR146Q96CH1 333 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 PLEKHB2Q96CS7 222 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 KCNS1Q96KK3 526 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 OR7D2Q96RA2 312 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 MND1Q9BWT6 205 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 MRPL20Q9BYC9 149 aaKnown RBP3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF436Q9C0F3 470 aaPredicted RBP3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 CHST6Q9GZX3 395 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 HMG20AQ9NP66 347 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 CALML5Q9NZT1 146 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 DPM3Q9P2X0 92 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 ANAPC10Q9UM13 185 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 POMPQ9Y244 141 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 PRSS21Q9Y6M0 314 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 U3KQ87 197 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 LRRK1Q38SD2 2015 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 CHD2O14647 1828 aaKnown RBP3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 WDR97A6NE52 1622 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 FGD6Q6ZV73 1430 aa3.19□□□□□ -1.9
SMARCA5-202ENST00000508573 CHD5Q8TDI0 1954 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 TMED7-TICAM2A0A0A6YYA0 188 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 BORCS7-ASMTA0A0B4J1R7 106 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 KNCNA6PVL3 124 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 K7EPK0 472 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 GYG2O15488 501 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 RGS5O15539 181 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 SRSF10O75494 262 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 TNFSF15O95150 251 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF682O95780 498 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 OR12D1P0DN82 309 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 SRIP30626 198 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 RBP2P50120 134 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 SYNJ2BPP57105 145 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 UBE2NP61088 152 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 MAXP61244 160 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 RPL23P62829 140 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 TNFAIP6P98066 277 aaPredicted RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 PLCXD2Q0VAA5 305 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 FCN2Q15485 313 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 PRR4Q16378 134 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 NHLRC3Q5JS37 347 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 IBA57Q5T440 356 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 NXNL2Q5VZ03 156 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ARL9Q6T311 187 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 SCIMPQ6UWF3 145 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 UNQ9165/PRO28630Q6UXU0 137 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF589Q86UQ0 364 aaPredicted RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 OR13C4Q8NGS5 318 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 VN1R17PQ8TDU5 208 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 DCAKDQ8WVC6 231 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 MBD3L1Q8WWY6 194 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF184Q99676 751 aaPredicted RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 POLR2J2Q9GZM3 115 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 C20orf27Q9GZN8 174 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 POLR2J3Q9H1A7 115 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 CDC42EP4Q9H3Q1 356 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ZNF696Q9H7X3 374 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 POPDC3Q9HBV1 291 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 PARP11Q9NR21 331 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 MARCH5Q9NX47 278 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 TMEM216Q9P0N5 145 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 KLK13Q9UKR3 277 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 PCYT1BQ9Y5K3 369 aaPredicted RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 ZCCHC11Q5TAX3 1644 aaKnown RBP3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 FAM135AQ9P2D6 1515 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 NFASCO94856 1347 aa3.18□□□□□ -1.9
SMARCA5-202ENST00000508573 BAZ2AQ9UIF9 1905 aaKnown RBP3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 RTL1A6NKG5 1358 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 LOC102725191A0A1B0GVB3 256 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 H3BSA7 217 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 M0R1X1 148 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 MRASO14807 208 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 TCF21O43680 179 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 ANGPTL7O43827 346 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 TBL1XO60907 577 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 NDUFC2O95298 119 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 CDS2O95674 445 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 IFNA4P05014 189 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 FABP3P05413 133 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 COX7A1P24310 79 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 KDELR1P24390 212 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 CNTFRP26992 372 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 HSPA9P38646 679 aaKnown RBP3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 MDH2P40926 338 aaKnown RBP3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 EVX1P49640 407 aa3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 GRB2P62993 217 aaKnown RBP3.17□□□□□ -1.9
SMARCA5-202ENST00000508573 RHEBQ15382 184 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms