RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 INSL3P51460 131 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 UNC119Q13432 240 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 RPL39P5Q59GN2 51 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 C19orf54Q5BKX5 351 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 C1orf100Q5SVJ3 147 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 GLDNQ6ZMI3 551 aaPredicted RBP8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 MINDY2Q8NBR6 621 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 TMED9Q9BVK6 235 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 ALX4Q9H161 411 aaPredicted RBP8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 FBXL15Q9H469 300 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 FKBP14Q9NWM8 211 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 PIPOXQ9P0Z9 390 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 SLC23A1Q9UHI7 598 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 ERGIC3Q9Y282 383 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 A0A0A6YYD4 124 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 RRHO14718 337 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 OVOL1O14753 267 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 RAB29O14966 203 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 SOX15O60248 233 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 NAPSAO96009 420 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 CRIP2P52943 208 aaPredicted RBP8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 SLURP1P55000 103 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 ZNF660Q6AZW8 331 aaPredicted RBP8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 ZNF880Q6PDB4 577 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 MS4A15Q8N5U1 240 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 KCNG3Q8TAE7 436 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 CASTOR1Q8WTX7 329 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 PHYHIPQ92561 330 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 ABHD14BQ96IU4 210 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 MND1Q9BWT6 205 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 A3GALT2U3KPV4 340 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 SORL1Q92673 2214 aa8.94□□□□□ -0.98
HMGCS1-204ENST00000507293 RYR3Q15413 4870 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 OR5H14A6NHG9 310 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 TMEM14DPA8MWL7 114 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 LINC01619G3V211 115 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 H0YJW9 148 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 H7C2Y5 167 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 SLC22A1O15245 554 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 SAP30O75446 220 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CDK1P06493 297 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CT45A6P0DMU7 189 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CT45A5P0DMU8 189 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CT45A7P0DMV0 189 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CX3CL1P78423 397 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 QRFPP83859 136 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 PLGLAQ15195 96 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 HSD17B12Q53GQ0 312 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 OGFRL1Q5TC84 451 aaPredicted RBP8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 MOB1BQ7L9L4 216 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 ZNF429Q86V71 674 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 DLX4Q92988 240 aaPredicted RBP8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 HDHD3Q9BSH5 251 aaPredicted RBP8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 TOLLIPQ9H0E2 274 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 PLEKHJ1Q9NW61 149 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 WASHC3Q9Y3C0 194 aa8.93□□□□□ -0.98
HMGCS1-204ENST00000507293 TENM3Q9P273 2699 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 A0A087WW49 117 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 FCN1O00602 326 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 SOCS1O15524 211 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 BPNT1O95861 308 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 GSTP1P09211 210 aaKnown RBP8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 EGR2P11161 476 aaPredicted RBP8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 SPNP16150 400 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 SRMP19623 302 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 MC5RP33032 325 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 HLA-DRB3P79483 266 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 P2RY14Q15391 338 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 SPHARQ15513 63 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 RNLSQ5VYX0 342 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 UNQ5815/PRO19632Q6UWF5 114 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 TCTEX1D1Q8N7M0 179 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 OR6M1Q8NGM8 313 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 ARPC1AQ92747 370 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 CLCC1Q96S66 551 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 FAM103A1Q9BTL3 118 aaKnown RBP8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 LPAR5Q9H1C0 372 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 OR1A1Q9P1Q5 309 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 AK3Q9UIJ7 227 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 GAB2Q9UQC2 676 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 LSM2Q9Y333 95 aaKnown RBP8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 NUBP2Q9Y5Y2 271 aa8.92□□□□□ -0.98
HMGCS1-204ENST00000507293 TRBV6-6A0A0A6YYG2 114 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 PTGES3LE9PB15 166 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 ITGB1BP1O14713 200 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 CASQ2O14958 399 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 RBBP9O75884 186 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 UCHL1P09936 223 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 CD37P11049 281 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms