RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ZBTB25P24278 435 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 HTR1DP28221 377 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 ETV6P41212 452 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 CBX5P45973 191 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 PRRX1P54821 245 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 FXYD4P59646 89 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 CDK10Q15131 360 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 LY6EQ16553 131 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 GLDNQ6ZMI3 551 aaPredicted RBP7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF554Q86TJ5 538 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 H1FOOQ8IZA3 346 aaPredicted RBP7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 OR2AK2Q8NG84 335 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 OR5AP2Q8NGF4 316 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 OR5H2Q8NGV7 314 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 ABHD14AQ9BUJ0 271 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 IFI27L2Q9H2X8 130 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 ESM1Q9NQ30 184 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 DPM3Q9P2X0 92 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 MGAT4AQ9UM21 535 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 FAM96BQ9Y3D0 163 aa7.13□□□□□ -1.27
SCAMP1-202ENST00000506858 CTDSPLO15194 276 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 GSTZ1O43708 216 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 IGHV4-59P01825 116 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RCVRNP35243 200 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 SRSF7Q16629 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 MIDNQ504T8 468 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TPTE2P1Q5T6R2 138 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 STEAP3Q658P3 488 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 BEND2Q8NDZ0 799 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 OR56B4Q8NH76 319 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF596Q8TC21 504 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TRIM63Q969Q1 353 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 AGMATQ9BSE5 352 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF2Q9BSG1 426 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 NECAP2Q9NVZ3 263 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RBMX2Q9Y388 322 aaKnown RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RBM7Q9Y580 266 aaKnown RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 SAA2-SAA4A0A096LPE2 208 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 LEUTXA8MZ59 168 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 HSD17B6O14756 317 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RAB3DO95716 219 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 FAM157CP0CG43 387 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 SAA2P0DJI9 122 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TNP2Q05952 138 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 DYRK1AQ13627 763 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 HNF4GQ14541 408 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 Q3ZCU0 254 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF660Q6AZW8 331 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 STEAP1BQ6NZ63 245 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 MOB3BQ86TA1 216 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TMEM17Q86X19 198 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 LINC00311Q8N616 119 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 DRAM1Q8N682 238 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TMEM229BQ8NBD8 167 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 PIFOQ8TCI5 191 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 SECTM1Q8WVN6 248 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 TOMM40LQ969M1 308 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RPEQ96AT9 228 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 SSX3Q99909 188 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF251Q9BRH9 671 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 MRPL20Q9BYC9 149 aaKnown RBP7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 OR2D2Q9H210 308 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 RAB9BQ9NP90 201 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 CCL28Q9NRJ3 127 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 OR2W1Q9Y3N9 320 aa7.12□□□□□ -1.27
SCAMP1-202ENST00000506858 FBN1P35555 2871 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 ANKRD20A5PA0PJZ0 165 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 OR5H14A6NHG9 310 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 TIMM23O14925 209 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 TNFSF12O43508 249 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 TUSC2O75896 110 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 RGS11O94810 467 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 VENTXO95231 258 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 AMY2AP04746 511 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF735P0CB33 412 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 PI3P19957 117 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 TSPAN5P62079 268 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 MRPS10P82664 201 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 BAMBIQ13145 260 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 KLF9Q13886 244 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 SCGB2B2Q4G0G5 96 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 RNASE10Q5GAN6 216 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 C9orf139Q6ZV77 190 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 PRIMA1Q86XR5 153 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 TMEM219Q86XT9 240 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 OR4C16Q8NGL9 310 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 MALSU1Q96EH3 234 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 RITA1Q96K30 269 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 SDHAF2Q9NX18 166 aa7.11□□□□□ -1.27
SCAMP1-202ENST00000506858 A0A1W2PPI3 338 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 H3BUX3 64 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 M0R1X1 148 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 TPPPO94811 219 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 PPYP01298 95 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms