RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 WBP2NLQ6ICG8 309 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR4C11Q6IEV9 310 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LCNL1Q6ZST4 164 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FA2HQ7L5A8 372 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RD3Q7Z3Z2 195 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM130Q8N3G9 435 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR52L2PQ8NGH6 319 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR4D11Q8NGI4 311 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM186Q96B77 213 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 SPACA9Q96E40 222 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PARLQ9H300 379 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ELOVL3Q9HB03 270 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MRM2Q9UI43 246 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HEBP2Q9Y5Z4 205 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 R4GMQ9 66 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PKD1L1Q8TDX9 2849 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NKX2-6A6NCS4 301 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 GAGE10A6NGK3 116 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ATXN7O15265 892 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ADAM20O43506 726 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 GPR75O95800 540 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CD55P08174 381 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4GP0DN37 164 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ID3Q02535 119 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RPS26P11Q5JNZ5 115 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 SAMD13Q5VXD3 122 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FAM90A2PQ658T7 463 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 Q6ZVL8 140 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C5orf24Q7Z6I8 188 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C8orf46Q8TAG6 207 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NUDT8Q8WV74 236 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM234Q8WY98 164 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 UHRF2Q96PU4 802 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PRDM14Q9GZV8 571 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PNRC2Q9NPJ4 139 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TRAPPC1Q9Y5R8 145 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CENPFP49454 3210 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LOC107986453A0A1B0GWG9 222 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 DCDC2BA2VCK2 349 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C7orf71A4D174 169 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 AQP7O14520 342 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HCRTR1O43613 425 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TBL1XO60907 577 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 B3GALT4O96024 378 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CGAP01215 116 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CLEC3BP05452 202 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CXCL1P09341 107 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PRSS56P0CW18 603 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HIST1H1CP16403 213 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NPY1RP25929 384 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CRYBB3P26998 211 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 EWSR1Q01844 656 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NFATC4Q14934 902 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CNN3Q15417 329 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TIGITQ495A1 244 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TCTEX1D4Q5JR98 221 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM220Q6QAJ8 160 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ATG4DQ86TL0 474 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FAM219AQ8IW50 185 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR10W1Q8NGF6 305 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR2K2Q8NGT1 345 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR11L1Q8NGX0 322 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR13G1Q8NGZ3 307 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CLDND2Q8NHS1 167 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 DOK4Q8TEW6 326 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RAB1CQ92928 201 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 Q96M85 177 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR2V2Q96R30 315 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LPAR5Q9H1C0 372 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM38BQ9NVV0 291 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C5AR2Q9P296 337 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ANXA10Q9UJ72 324 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PAM16Q9Y3D7 125 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 A0A0U1RQK1 487 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF320A2RRD8 509 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 P2RY10O00398 339 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 RBMXL2O75526 392 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ADH1BP00325 375 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PSMB10P40306 273 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 APOBEC1P41238 236 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CA7P43166 264 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 INSL4Q14641 139 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ICAM4Q14773 271 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C4orf17Q53FE4 359 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C1orf140Q5VVS0 124 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 STUMQ69YW2 141 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SPSB3Q6PJ21 355 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PLXDC2Q6UX71 529 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MEX3BQ6ZN04 569 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CDC20BQ86Y33 519 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SLC22A18ASQ8N1D0 253 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 LYG1Q8N1E2 194 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM217Q8N7C4 229 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SLC16A11Q8NCK7 471 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM255BQ8WV15 326 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 FGF13Q92913 245 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TOMM40LQ969M1 308 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms