RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ESRP2Q9H6T0 727 aaKnown RBP13.9□□□□□ -0.18
VCAN-204ENST00000502527 MSL2Q9HCI7 577 aa13.9□□□□□ -0.18
VCAN-204ENST00000502527 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
VCAN-204ENST00000502527 IGHV2OR16-5A0A0B4J2B6 119 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 PTBP3O95758 552 aaKnown RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 ARG1P05089 322 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 AGAP20933 346 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 EIF4EBP1Q13541 118 aaPredicted RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 DEFB109BQ30KR1 87 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 ZNF808Q8N4W9 903 aaPredicted RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 TCTEX1D1Q8N7M0 179 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 ZNF610Q8N9Z0 462 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 LURAP1Q96LR2 239 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 RPRMQ9NS64 109 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 IGHV1-18A0A0C4DH31 117 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 A0A1W2PPE2 198 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 PPIHO43447 177 aaKnown RBP13.89□□□□□ -0.19
VCAN-204ENST00000502527 RAMP3O60896 148 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 TNFSF13O75888 250 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 CEBPGP53567 150 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 COL10A1Q03692 680 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 CYB561D1Q8N8Q1 229 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 OR10G4Q8NGN3 311 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 RBKSQ9H477 322 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 HSPB7Q9UBY9 170 aa13.89□□□□□ -0.19
VCAN-204ENST00000502527 KRASP01116 189 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 P0C879 139 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 RPL30P62888 115 aaKnown RBP13.88□□□□□ -0.19
VCAN-204ENST00000502527 BHLHA15Q7RTS1 189 aaPredicted RBP13.88□□□□□ -0.19
VCAN-204ENST00000502527 FAM169BQ8N8A8 192 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 STARD4Q96DR4 205 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 C5orf30Q96GV9 206 aa13.88□□□□□ -0.19
VCAN-204ENST00000502527 WDR61Q9GZS3 305 aaKnown RBP13.88□□□□□ -0.19
VCAN-204ENST00000502527 OPN3Q9H1Y3 402 aaPredicted RBP13.88□□□□□ -0.19
VCAN-204ENST00000502527 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
VCAN-204ENST00000502527 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 A0A1B0GWJ7 208 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 ZNF98A6NK75 572 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 OR5H1A6NKK0 313 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 OR2C1O95371 312 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 CLDN1O95832 211 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 S100A6P06703 90 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 MAS1LP35410 378 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 G6PCP35575 357 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 GLIPR1P48060 266 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 RPS23P62266 143 aaKnown RBP13.87□□□□□ -0.19
VCAN-204ENST00000502527 HOXA4Q00056 320 aaPredicted RBP13.87□□□□□ -0.19
VCAN-204ENST00000502527 ZNF816Q0VGE8 651 aaPredicted RBP13.87□□□□□ -0.19
VCAN-204ENST00000502527 OR2B11Q5JQS5 317 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 TMEM14EPQ6UXP3 125 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 TCTEX1D2Q8WW35 142 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
VCAN-204ENST00000502527 RAB39BQ96DA2 213 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 NIPSNAP3BQ9BS92 247 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 DKK4Q9UBT3 224 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 CGAP01215 116 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 SNRPEP62304 92 aaKnown RBP13.87□□□□□ -0.19
VCAN-204ENST00000502527 SLC38A11Q08AI6 406 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 ZNF787Q6DD87 383 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 TVP23CQ96ET8 276 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 GNG13Q9P2W3 67 aa13.87□□□□□ -0.19
VCAN-204ENST00000502527 A0A087WWC5 75 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 hCG_1809904A0A1W2PP81 198 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 A0A1W2PR64 198 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 A0A1W2PRV1 198 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 LRRC30A6NM36 301 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 SPINT2O43291 252 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 CEACAM4O75871 244 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 CLDN14O95500 239 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 TFF1P04155 84 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 FBP1P09467 338 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 TAGLN2P37802 199 aaKnown RBP13.86□□□□□ -0.19
VCAN-204ENST00000502527 PAX5Q02548 391 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 EIF2S3LQ2VIR3 472 aaKnown RBP13.86□□□□□ -0.19
VCAN-204ENST00000502527 FAM53AQ6NSI3 398 aaPredicted RBP13.86□□□□□ -0.19
VCAN-204ENST00000502527 ZNF66Q6ZN08 573 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 BEND4Q6ZU67 534 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 ZADH2Q8N4Q0 377 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 OR13A1Q8NGR1 328 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 LRRC29Q8WV35 223 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
VCAN-204ENST00000502527 TAAR6Q96RI8 345 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 VSIRQ9H7M9 311 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 METRNQ9UJH8 293 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 LAMP3Q9UQV4 416 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 ODAMA1E959 279 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 C17orf98A8MV24 154 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 S1PR2O95136 353 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 SSTR5P35346 364 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 SLC35E3Q7Z769 313 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms