RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 LYPD2Q6UXB3 125 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 C1orf122Q6ZSJ8 110 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 ZNF546Q86UE3 836 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 TGIF2LYQ8IUE0 185 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 DRAXINQ8NBI3 349 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-210ENST00000498259 OR10X1Q8NGY0 326 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 OR51H1Q8NH63 302 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 OR9G1Q8NH87 305 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 C8orf46Q8TAG6 207 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 ZNF596Q8TC21 504 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 PPP1R1CQ8WVI7 109 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 TCTEX1D2Q8WW35 142 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 TMEM186Q96B77 213 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 SEC22AQ96IW7 307 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 C18orf12Q96KH6 178 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 PIMREGQ9BSJ6 248 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 C19orf12Q9NSK7 152 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 DCAF16Q9NXF7 216 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 AMMECR1Q9Y4X0 333 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-210ENST00000498259 SESN1Q9Y6P5 492 aa6.98□□□□□ -1.29
SF3A1-210ENST00000498259 A0A087X0M5 115 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 IGHV3-43A0A0B4J1X8 118 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 A0A1B0GX30 115 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 C17orf98A8MV24 154 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 LYNX1G3V0Z9 82 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 L7N2F9 121 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 M0R1W7 72 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 WRBO00258 174 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 ST8SIA3O43173 380 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 TXNL1O43396 289 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 TNFSF12O43508 249 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 ENSAO43768 121 aaKnown RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 FOXH1O75593 365 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 OR2F2O95006 317 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SIX6O95475 246 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 IGHV3-43DP0DP04 118 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 LYNX1P0DP58 116 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SELLP14151 372 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 AKR1C2P52895 323 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 ERVK-16P61578 105 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 HOXA4Q00056 320 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 CD300CQ08708 224 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 CHD3Q12873 2000 aaKnown RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 OR2F1Q13607 317 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 RTL8BQ17RB0 113 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 AVPI1Q5T686 147 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 GGNBP1Q5YKI7 109 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 WDR25Q64LD2 544 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 DHRS7BQ6IAN0 325 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SLC25A48Q6ZT89 311 aaKnown RBP6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SPAG16Q8N0X2 631 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 LYG1Q8N1E2 194 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 KIR3DL3Q8N743 410 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SLC35G3Q8N808 338 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 OR13D1Q8NGV5 346 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 OR4S2Q8NH73 311 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 UBALD1Q8TB05 177 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 FAM168AQ92567 244 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 CYYR1Q96J86 154 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 AGMATQ9BSE5 352 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 GON7Q9BXV9 100 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 HEXA-AS1Q9H8Q6 139 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 SDHAF2Q9NX18 166 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 CTSZQ9UBR2 303 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 RNF150Q9ULK6 438 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 HSPB11Q9Y547 144 aa6.97□□□□□ -1.29
SF3A1-210ENST00000498259 ICE1Q9Y2F5 2266 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 A0A1B0GW55 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 CLEC18AA5D8T8 446 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 M0R1X1 148 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 MED6O75586 246 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ADAP1O75689 374 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 SCAF4O95104 1147 aaKnown RBP6.96□□□□□ -1.3
SF3A1-210ENST00000498259 MPC2O95563 127 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 HPRT1P00492 218 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 HRASP01112 189 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 APOA2P02652 100 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L2P0CJ85 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L3P0CJ86 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L4P0CJ87 422 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L5P0CJ88 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L6P0CJ89 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4L7P0CJ90 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 IGHV1-8P0DP01 117 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 MMP9P14780 707 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 PAX1P15863 534 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 EPHA1P21709 976 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 OMGP23515 440 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 MC5RP33032 325 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 CEACAM3P40198 252 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ATP5J2P56134 94 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 EIF5AP63241 154 aaKnown RBP6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF345Q14585 488 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DCAF12L2Q5VW00 463 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 PRSS54Q6PEW0 395 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms