RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 C20orf24Q9BUV8 137 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 WDR13Q9H1Z4 485 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 GPR132Q9UNW8 380 aa9.9□□□□□ -0.83
BRCA1-222ENST00000493919 DOPEY1Q5JWR5 2465 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 PCNX1Q96RV3 2341 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 BAHCC1Q9P281 2608 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 SPTAN1Q13813 2472 aaKnown RBP9.89□□□□□ -0.83
BRCA1-222ENST00000493919 A0A1B0GTI1 187 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 CXCL13O43927 109 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 NTN1O95631 604 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 MAS1P04201 325 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 TFPIP10646 304 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 PSG2P11465 335 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 GNB3P16520 340 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 TNFRSF1BP20333 461 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 PRKACGP22612 351 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 GABRA5P31644 462 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 GNG4P50150 75 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 HBMQ6B0K9 141 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM179BQ7Z7N9 219 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 SYS1Q8N2H4 156 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 ZPLD1Q8TCW7 415 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 RND1Q92730 232 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 WFDC6Q9BQY6 131 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 INPP5EQ9NRR6 644 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 TESQ9UGI8 421 aaKnown RBP9.89□□□□□ -0.83
BRCA1-222ENST00000493919 PHF3Q92576 2039 aaKnown RBP9.89□□□□□ -0.83
BRCA1-222ENST00000493919 ARHGAP21Q5T5U3 1957 aa9.89□□□□□ -0.83
BRCA1-222ENST00000493919 TMED7-TICAM2A0A0A6YYA0 188 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 A0A0J9YW62 118 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 A0A1W2PNR3 127 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SLC22A20A6NK97 555 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 UMAD1C9J7I0 102 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ETV2O00321 342 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SYNGR3O43761 229 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 EFNA2O43921 213 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 UBL3O95164 117 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF682O95780 498 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 CXCL1P09341 107 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 GLI4P10075 376 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ELK1P19419 428 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 APOBEC1P41238 236 aaKnown RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR3A4PP47883 348 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF136P52737 540 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 PAX9P55771 341 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM267Q0VDI3 215 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SYT14P1Q58G82 188 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM211Q6ICI0 200 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 H2BFWTQ7Z2G1 175 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ST6GALNAC5Q9BVH7 336 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 PRRG4Q9BZD6 226 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR11A1Q9GZK7 315 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 FUT9Q9Y231 359 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 TMED7Q9Y3B3 224 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 WIPI2Q9Y4P8 454 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 A1L4Q6 167 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 GAGE12HA6NDE8 117 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 B4DEV8 164 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ST8SIA3O43173 380 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 IGLC1P0CG04 106 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 H2BFSP57053 126 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 RPS25P62851 125 aaKnown RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ENDOGQ14249 297 aaKnown RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 ANKRD34AQ69YU3 496 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SEM1Q6ZVN7 128 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 KLHDC1Q8N7A1 406 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 C9orf106Q8NAJ2 232 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR6T1Q8NGN1 323 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR9G4Q8NGQ1 327 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR13G1Q8NGZ3 307 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 FNDC9Q8TBE3 224 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SLC25A43Q8WUT9 341 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-222ENST00000493919 SECTM1Q8WVN6 248 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 OR10C1Q96KK4 312 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 CLCF1Q9UBD9 225 aa9.88□□□□□ -0.83
BRCA1-222ENST00000493919 TRBV24-1A0A075B6N3 115 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 TRAV14DV4A0A0A6YYC5 116 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 A0A1B0GWA3 101 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 CPSF4LA6NMK7 179 aaKnown RBP9.87□□□□□ -0.83
BRCA1-222ENST00000493919 FAM90A27PA6NNH2 459 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 IL2RAP01589 272 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 OR1E2P47887 323 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF266Q14584 549 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 PSG5Q15238 335 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 AADACL3Q5VUY0 350 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 ERASQ7Z444 233 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 TSEN54Q7Z6J9 526 aaKnown RBP9.87□□□□□ -0.83
BRCA1-222ENST00000493919 DDIT4LQ96D03 193 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 SLAMF6Q96DU3 332 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 MCHR1Q99705 422 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 SRXN1Q9BYN0 137 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 Q9UFV3 132 aa9.87□□□□□ -0.83
BRCA1-222ENST00000493919 MCTS1Q9ULC4 181 aaKnown RBP9.87□□□□□ -0.83
BRCA1-222ENST00000493919 ETV7Q9Y603 341 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms