RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 A0A1B0GW55 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 ITGB1BP1O14713 200 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 NDUFB3O43676 98 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 YPEL1O60688 119 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 OR8U9P0C7N5 309 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-210ENST00000490808 VDAC1P21796 283 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 UCP1P25874 307 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 IFITM2Q01629 132 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 GNMTQ14749 295 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 SLC51BQ86UW2 128 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 ZNRF1Q8ND25 227 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 OR8U1Q8NH10 309 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
HDAC3-210ENST00000490808 CD300LFQ8TDQ1 290 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 IGFBPL1Q8WX77 278 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DCUN1D4Q92564 292 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 CCL17Q92583 94 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 CORO2AQ92828 525 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 MSI2Q96DH6 328 aaKnown RBP8.54□□□□□ -1.04
HDAC3-210ENST00000490808 CYYR1Q96J86 154 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 C18orf12Q96KH6 178 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 FOXC2Q99958 501 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 GAL3ST2Q9H3Q3 398 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 PLEKHA2Q9HB19 425 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 TAS2R3Q9NYW6 316 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 OR1A1Q9P1Q5 309 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 TNFSF18Q9UNG2 199 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 BOLA1Q9Y3E2 137 aa8.54□□□□□ -1.04
HDAC3-210ENST00000490808 TRAV39A0A0B4J263 110 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 IGKV1D-13A0A0B4J2D9 117 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 G3V3Q6 166 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 TAAR5O14804 337 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 ZNF205O95201 554 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 GYPAP02724 150 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 IGKV1-13P0DP09 117 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 SLC25A6P12236 298 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 LYL1P12980 280 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 S100A10P60903 97 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 UBA52P62987 128 aaKnown RBP8.53□□□□□ -1.04
HDAC3-210ENST00000490808 SWI5Q1ZZU3 235 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 SP6Q3SY56 376 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 Q5BKY6 102 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 TEX261Q6UWH6 196 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 DEFB108BQ8NET1 73 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 OR13A1Q8NGR1 328 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 NEU4Q8WWR8 484 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-210ENST00000490808 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 HSD17B10Q99714 261 aaKnown RBP8.53□□□□□ -1.04
HDAC3-210ENST00000490808 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 U3KQ87 197 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 TLN2Q9Y4G6 2542 aa8.53□□□□□ -1.04
HDAC3-210ENST00000490808 TANC2Q9HCD6 1990 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 A0A1B0GU03 582 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 E5RGE8 158 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 OVOL3O00110 214 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 F2RL2O00254 374 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 WRBO00258 174 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 GPR37O15354 613 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 TMPRSS2O15393 492 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 PLAUP00749 431 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 NDUFB7P17568 137 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 CXCL2P19875 107 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 KIR2DS2P43631 304 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 MRPS11P82912 194 aaKnown RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 DEFB113Q30KQ7 82 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 SLC35G3Q8N808 338 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
HDAC3-210ENST00000490808 LSM10Q969L4 123 aaKnown RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
HDAC3-210ENST00000490808 TIMD4Q96H15 378 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms