RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 C1orf100Q5SVJ3 147 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 DUX4L9Q6RFH8 374 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 C1orf122Q6ZSJ8 110 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 SNX29P2Q8IUI4 249 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 Q8N402 240 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 Q8NFD4 153 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 OR4D6Q8NGJ1 314 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 OR51T1Q8NGJ9 327 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 KCNG3Q8TAE7 436 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 NANPQ8TBE9 248 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 S100A16Q96FQ6 103 aaKnown RBP6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 ZNF48Q96MX3 618 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 SDHCQ99643 169 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 NKX3-1Q99801 234 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 SPACA1Q9HBV2 294 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 ONECUT1Q9UBC0 465 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 DUX4Q9UBX2 424 aa6.56□□□□□ -1.36
TRAPPC12-221ENST00000489032 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 DOCK11Q5JSL3 2073 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 hADV38S2A0JD32 116 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 NPIPB11E5RHQ5 1161 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 SLC17A2O00624 439 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 ZNF737O75373 536 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 NDUFB4O95168 129 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PAHP00439 452 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 HLA-DQB1P01920 261 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 EIF4EP06730 217 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 HOXB5P09067 269 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 MGMTP16455 207 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 ADRA2CP18825 462 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 LMO1P25800 156 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 KCNJ3P48549 501 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 BCAP31P51572 246 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 RBM11P57052 281 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 ARF6P62330 175 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 MRPS10P82664 201 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PAX2Q02962 417 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 MEF2CQ06413 473 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 RBM39Q14498 530 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 EDDM3AQ14507 147 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM189A2Q15884 450 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PIGYQ3MUY2 71 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PAN3Q58A45 887 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 NHLRC3Q5JS37 347 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 ATAD3CQ5T2N8 411 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 HES5Q5TA89 166 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 Q6ZSV7 163 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 OR2W3Q7Z3T1 314 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 OR4M1Q8NGD0 313 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 C8orf46Q8TAG6 207 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 NEK7Q8TDX7 302 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 PCGF1Q9BSM1 259 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 URM1Q9BTM9 101 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 TMEM59Q9BXS4 323 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 SELENOIQ9C0D9 397 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 CHST6Q9GZX3 395 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 ABCG5Q9H222 651 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 LSM4Q9Y4Z0 139 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 KPTNQ9Y664 436 aa6.55□□□□□ -1.36
TRAPPC12-221ENST00000489032 TRGV10A0A0A0MS01 117 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 A0A1W2PP11 408 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM90A10PA6NDY2 464 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM90A8PA6NJQ4 464 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 CENPXA8MT69 81 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 MCRIP1C9JLW8 97 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 M0R1W7 72 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 SLC33A1O00400 549 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 GEMIN2O14893 280 aaKnown RBP6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 CTDSPLO15194 276 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 SCGB1D1O95968 90 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 CSN2P05814 226 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM90A13PP0C7W8 464 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM90A24PP0C7X0 464 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 ERP29P30040 261 aaKnown RBP6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 P2RY14Q15391 338 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 TAF9Q16594 264 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 ODF3L2Q3SX64 289 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 KRBOX4Q5JUW0 171 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 GPR157Q5UAW9 335 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 Q6P435 159 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 C17orf107Q6ZR85 190 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 TRAPPC6BQ86SZ2 158 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 ZNF554Q86TJ5 538 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 LYPD6Q86Y78 171 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FGFRL1Q8N441 504 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 KIR3DL3Q8N743 410 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 LY6G5BQ8NDX9 201 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 OR4S1Q8NGB4 309 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 ENKURQ8TC29 256 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 LGALS14Q8TCE9 139 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 FAM46BQ96A09 425 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 PHF21AQ96BD5 680 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 NEDD4LQ96PU5 975 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 PPA2Q9H2U2 334 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 BANF2Q9H503 90 aa6.54□□□□□ -1.36
TRAPPC12-221ENST00000489032 DIABLOQ9NR28 239 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms