RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CEACAM16Q2WEN9 425 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 LHX4Q969G2 390 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 SDSLQ96GA7 329 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 PRR14LQ5THK1 2151 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 DUXBA0A1W2PPF3 345 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 SLC22A20A6NK97 555 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 SYNGR3O43761 229 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 RFPL3SP0C7P2 107 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 LINC00614P0C842 121 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 SP9P0CG40 484 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 SELEP16581 610 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 RBM11P57052 281 aaKnown RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF525Q8N782 197 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 NEK7Q8TDX7 302 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 EXTL1Q92935 676 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 PARLQ9H300 379 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 CRYABP02511 175 aaKnown RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 IAPPP10997 89 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 CRYGSP22914 178 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 PSG4Q00888 419 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 TMEM41BQ5BJD5 291 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 CISD2Q8N5K1 135 aaKnown RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 GPR146Q96CH1 333 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 LPAR2Q9HBW0 351 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 A0A1W2PR80 420 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
COL9A2-207ENST00000482722 CBR3O75828 277 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 Q0VFX4 171 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 TDRG1Q3Y452 100 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 HAPLN4Q86UW8 402 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 TMEM38BQ9NVV0 291 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 LILRA1O75019 489 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 TYMSP04818 313 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 BATFQ16520 125 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 CST9LP1Q5W188 147 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 OR5D13Q8NGL4 314 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 MRPL30Q8TCC3 161 aaKnown RBP12.15□□□□□ -0.46
COL9A2-207ENST00000482722 WDR54Q9H977 334 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 SLC39A9Q9NUM3 307 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 LOXL2Q9Y4K0 774 aa12.15□□□□□ -0.46
COL9A2-207ENST00000482722 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.47
COL9A2-207ENST00000482722 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 CCL2P13500 99 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 BRS3P32247 399 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 DHRS13Q6UX07 377 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 Q6ZRM9 215 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 FOXL2NBQ6ZUU3 175 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 DTD1Q8TEA8 209 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 ABHD3Q8WU67 409 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 FOXB1Q99853 325 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 LOC102723996A0A087X1L8 192 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 GYPAP02724 150 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 P04436 131 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 SERF2P84101 59 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 ANKRD39Q53RE8 183 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
COL9A2-207ENST00000482722 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 RAB40CQ96S21 281 aa12.14□□□□□ -0.47
COL9A2-207ENST00000482722 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
COL9A2-207ENST00000482722 EDN3P14138 238 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 IL3RAP26951 378 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 GCH1P30793 250 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 CHRNA7P36544 502 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 RAC3P60763 192 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 SRYQ05066 204 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 OR2Y1Q8NGV0 311 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 ANAPC16Q96DE5 110 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 DOCK11Q5JSL3 2073 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 H0Y980 276 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
COL9A2-207ENST00000482722 BCL3P20749 454 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 FOLR3P41439 243 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 DUSP3P51452 185 aaPredicted RBP12.13□□□□□ -0.47
COL9A2-207ENST00000482722 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
COL9A2-207ENST00000482722 FAM78BQ5VT40 261 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 TOMM20LQ6UXN7 152 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 OR10D3Q8NH80 312 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
COL9A2-207ENST00000482722 PARD6AQ9NPB6 346 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 PCSK5Q92824 1860 aa12.13□□□□□ -0.47
COL9A2-207ENST00000482722 A0A096LPE4 126 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms