RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PIGBOS1A0A0B4J2F0 54 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 H0Y980 276 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 HSPA12AO43301 675 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 S100GP29377 79 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
CHD3-211ENST00000481999 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 WFDC8Q8IUA0 241 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 MRPL37Q9BZE1 423 aaKnown RBP12.12□□□□□ -0.47
CHD3-211ENST00000481999 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 SMDT1Q9H4I9 107 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
CHD3-211ENST00000481999 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
CHD3-211ENST00000481999 ID3Q02535 119 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 BAXQ07812 192 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 KCNJ16Q9NPI9 418 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ZNF98A6NK75 572 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
CHD3-211ENST00000481999 M0R036 132 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 SH2D1BO14796 132 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 IFNA4P05014 189 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
CHD3-211ENST00000481999 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 PKD1L2Q7Z442 2459 aa12.11□□□□□ -0.47
CHD3-211ENST00000481999 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
CHD3-211ENST00000481999 TMEM210A6NLX4 147 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 PGLYRP1O75594 196 aaPredicted RBP12.1□□□□□ -0.47
CHD3-211ENST00000481999 MT-ND4LP03901 98 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OMGP23515 440 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 PPP1CCP36873 323 aaKnown RBP12.1□□□□□ -0.47
CHD3-211ENST00000481999 AKR1C3P42330 323 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 RNF212Q495C1 297 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
CHD3-211ENST00000481999 COQ2Q96H96 371 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 USP24Q9UPU5 2620 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 FBXO7Q9Y3I1 522 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
CHD3-211ENST00000481999 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 WRBO00258 174 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 SELLP14151 372 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 PTAFRP25105 342 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 CD40P25942 277 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 SSTR5P35346 364 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 GLIPR1P48060 266 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 TMPRSS3P57727 454 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 COL10A1Q03692 680 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 RHEBQ15382 184 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 SHEQ5VZ18 495 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 ZNF880Q6PDB4 577 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 DUX4L9Q6RFH8 374 aaPredicted RBP12.1□□□□□ -0.47
CHD3-211ENST00000481999 MOGAT3Q86VF5 341 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 Q8IYB0 196 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 CD177Q8N6Q3 437 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 OR2W1Q9Y3N9 320 aa12.1□□□□□ -0.47
CHD3-211ENST00000481999 IGLV2-14P01704 120 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 THBDP07204 575 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 F2RP25116 425 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 GABRA2P47869 451 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
CHD3-211ENST00000481999 EDDM3AQ14507 147 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 RFESDQ8TAC1 157 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 MRGPRDQ8TDS7 321 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 IFT22Q9H7X7 185 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 VPS13CQ709C8 3753 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 IGHV3-13P01766 116 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 IGHV3-7P01780 117 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 HABP2Q14520 560 aaPredicted RBP12.09□□□□□ -0.47
CHD3-211ENST00000481999 TESK1Q15569 626 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 ADAM5Q6NVV9 412 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 CD300LFQ8TDQ1 290 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 ITLN1Q8WWA0 313 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
CHD3-211ENST00000481999 COA4Q9NYJ1 87 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
CHD3-211ENST00000481999 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 TMEM50AO95807 157 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 GLRXP35754 106 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms