RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 UBE2G2P60604 165 aa17.56■□□□□ 0.4
COL13A1-208ENST00000479733 CCL7P80098 99 aa17.56■□□□□ 0.4
COL13A1-208ENST00000479733 TECTBQ96PL2 329 aa17.56■□□□□ 0.4
COL13A1-208ENST00000479733 TRAV24A0A0B4J272 114 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 IGHV3-64DA0A0J9YX35 117 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 A0A1B0GWJ7 208 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A10PA6NDY2 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A18PA6NE21 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A16PA6NEW6 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A20PA6NIJ5 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A8PA6NJQ4 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A7PA6NKC0 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A22PA8MWA6 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A12PA8MX19 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A5PA8MXJ8 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A23PA8MXZ1 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 NGFP01138 241 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 IGLV2-14P01704 120 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A15PP0C7V4 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A13PP0C7W8 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A14PP0C7W9 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FAM90A24PP0C7X0 464 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 IL3RAP26951 378 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 HOXA6P31267 233 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 CCKARP32238 428 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 SSR4P51571 173 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 FFAR4Q5NUL3 377 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 SF3B5Q9BWJ5 86 aaKnown RBP17.55■□□□□ 0.4
COL13A1-208ENST00000479733 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 TMEM250H0YL14 139 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 GCH1P30793 250 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 TDGF1P3P51864 188 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 C21orf62-AS1Q17RA5 79 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 SPINK9Q5DT21 86 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 TCF23Q7RTU1 214 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 MS4A10Q96PG2 267 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 RBM14Q96PK6 669 aaKnown RBP17.55■□□□□ 0.4
COL13A1-208ENST00000479733 CLN8Q9UBY8 286 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 NAGKQ9UJ70 344 aa17.55■□□□□ 0.4
COL13A1-208ENST00000479733 CBR3O75828 277 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 RFPL3SP0C7P2 107 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 SLC25A6P12236 298 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 NPPCP23582 126 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 Q8NFD4 153 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 OR10D3Q8NH80 312 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 OR5P3Q8WZ94 311 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 TBX15Q96SF7 602 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 TMEM9BQ9NQ34 198 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 IGHV5-10-1A0A0J9YXX1 117 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 GRIFINA4D1Z8 144 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 LILRA1O75019 489 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 GGCTO75223 188 aaKnown RBP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 KRASP01116 189 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 TFF3Q07654 80 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 CEACAM21Q3KPI0 293 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 WIPI1Q5MNZ9 446 aaPredicted RBP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 CENPVQ7Z7K6 275 aaPredicted RBP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 FGFRL1Q8N441 504 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 CISD2Q8N5K1 135 aaKnown RBP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 ANAPC16Q96DE5 110 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 HNF1AP20823 631 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 MPLP40238 635 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 BATFQ16520 125 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 SRSF7Q16629 238 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 TDRG1Q3Y452 100 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 KCNIP4Q6PIL6 250 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 LSM10Q969L4 123 aaKnown RBP17.54■□□□□ 0.4
COL13A1-208ENST00000479733 SPSB4Q96A44 273 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 CCDC74BQ96LY2 380 aa17.54■□□□□ 0.4
COL13A1-208ENST00000479733 C1orf194Q5T5A4 169 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 HLA-CQ95604 372 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 DERL1Q9BUN8 251 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 REPIN1Q9BWE0 567 aaKnown RBP17.53■□□□□ 0.4
COL13A1-208ENST00000479733 CTXND1A0A1B0GTU2 59 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 GJE1A6NN92 205 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 RPS19BP1Q86WX3 136 aaKnown RBP17.53■□□□□ 0.4
COL13A1-208ENST00000479733 PRRG4Q9BZD6 226 aa17.53■□□□□ 0.4
COL13A1-208ENST00000479733 USF3Q68DE3 2245 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 C11orf94C9JXX5 98 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 TMPRSS7Q7RTY8 843 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 GGNQ86UU5 652 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 SMRP1Q8NCR6 262 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 NEIL1Q96FI4 390 aaPredicted RBP17.52■□□□□ 0.4
COL13A1-208ENST00000479733 RHBDL1O75783 438 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 MBP02144 154 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 FOXG1P55316 489 aaPredicted RBP17.52■□□□□ 0.4
COL13A1-208ENST00000479733 DLL3Q9NYJ7 618 aa17.52■□□□□ 0.4
COL13A1-208ENST00000479733 C1QTNF9P0C862 333 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 ZXDAP98168 799 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 MRPL14Q6P1L8 145 aaKnown RBP17.51■□□□□ 0.39
COL13A1-208ENST00000479733 CADM4Q8NFZ8 388 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 IGHV1-45A0A0A0MS14 117 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 SIRPB1O00241 398 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 G6PCP35575 357 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 B3GALT5-AS1P59052 145 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 ARF1P84077 181 aaKnown RBP17.51■□□□□ 0.39
COL13A1-208ENST00000479733 SRYQ05066 204 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 ACSF3Q4G176 576 aaPredicted RBP17.51■□□□□ 0.39
COL13A1-208ENST00000479733 TOMM20LQ6UXN7 152 aa17.51■□□□□ 0.39
COL13A1-208ENST00000479733 TMEM204Q9BSN7 226 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms