RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KCNJ3P48549 501 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 GNG10P50151 68 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 PRRX1P54821 245 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 MEF2DQ14814 521 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 HLA-DRB5Q30154 266 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 FBLN7Q53RD9 439 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 ACTBL2Q562R1 376 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 FAM53AQ6NSI3 398 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-221ENST00000477561 PLET1Q6UQ28 207 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 TREML4Q6UXN2 200 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 Q6ZS46 218 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 NRARPQ7Z6K4 114 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 OR2T6Q8NHC8 308 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF596Q8TC21 504 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 NUDCD2Q8WVJ2 157 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 NPFFR1Q9GZQ6 430 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 IFT22Q9H7X7 185 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 HRASLSQ9HDD0 168 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 COPZ2Q9P299 210 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 PSG11Q9UQ72 335 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 KIAA2026Q5HYC2 2103 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 A0A087X0M5 115 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 IGHV3-43A0A0B4J1X8 118 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 A0A1B0GX30 115 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 TMEM30CPA0ZSE6 113 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 UBE2QL1A1L167 161 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 MEIS3P1A6NDR6 274 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF736B4DX44 427 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-221ENST00000477561 NPIPB11E5RHQ5 1161 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 J3QR06 171 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 MT-ND4P03905 459 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 IGHV3-43DP0DP04 118 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 DTYMKP23919 212 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 RFX2P48378 723 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 DYNLT3P51808 116 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 BLCAPP62952 87 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 TPTE2P1Q5T6R2 138 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 SIGIRRQ6IA17 410 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 STEAP1BQ6NZ63 245 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF497Q6ZNH5 498 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 LIAT1Q6ZQX7 453 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 C6orf201Q7Z4U5 140 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 C5orf24Q7Z6I8 188 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 KLHDC1Q8N7A1 406 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 DUSP18Q8NEJ0 188 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 OR4K15Q8NH41 348 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 OR9G1Q8NH87 305 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ARL11Q969Q4 196 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 CMSS1Q9BQ75 279 aaKnown RBP6.64□□□□□ -1.35
HDAC6-221ENST00000477561 MMP28Q9H239 520 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 RIMS4Q9H426 269 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-221ENST00000477561 NCOR1P1Q9H4R4 102 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF702PQ9H963 129 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 MCUBQ9NWR8 336 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 RCC2Q9P258 522 aaKnown RBP6.64□□□□□ -1.35
HDAC6-221ENST00000477561 PITPNC1Q9UKF7 332 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
HDAC6-221ENST00000477561 SH2D7A6NKC9 451 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 DISC1C4P0D8 188 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 LY6LH3BQJ8 138 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 C15orf65H3BRN8 121 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 SDCBPO00560 298 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 TIMM23O14925 209 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 SSX5O60225 188 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 RAB3DO95716 219 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 CD74P04233 296 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 IFNA6P05013 189 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 NAT1P18440 290 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 GZMHP20718 246 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 SLC6A1P30531 599 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 BRS3P32247 399 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 CEACAM3P40198 252 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 TAS2R46P59540 309 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 PAX5Q02548 391 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 TMEM95Q3KNT9 176 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 ARSJQ5FYB0 599 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 RNASE10Q5GAN6 216 aaKnown RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 LYG1Q8N1E2 194 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 PRR18Q8N4B5 295 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 CAPSLQ8WWF8 208 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 TOMM40LQ969M1 308 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 CREB3L1Q96BA8 519 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 SULT4A1Q9BR01 284 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 FAAP24Q9BTP7 215 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 PRSS22Q9GZN4 317 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 RANBP3Q9H6Z4 567 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 CHMP1AQ9HD42 196 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 C12orf4Q9NQ89 552 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 AK3Q9UIJ7 227 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 SCP2D1Q9UJQ7 156 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 ELF5Q9UKW6 265 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-221ENST00000477561 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 NUBP2Q9Y5Y2 271 aa6.63□□□□□ -1.35
HDAC6-221ENST00000477561 C12orf77C9JDV5 145 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms