RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OR1L8Q8NGR8 309 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 OR2V1Q8NHB1 315 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 AP3S1Q92572 193 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 SLC35B4Q969S0 331 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 ANKRD36BP1Q96IX9 119 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 PEBP4Q96S96 227 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 CENPHQ9H3R5 247 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 FBXO5Q9UKT4 447 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 CHD2O14647 1828 aaKnown RBP3.11□□□□□ -1.91
SMC5-203ENST00000475540 EIF3AQ14152 1382 aaKnown RBP3.11□□□□□ -1.91
SMC5-203ENST00000475540 K7EQS6 105 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 CHP2O43745 196 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 LTAP01374 205 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 REG1AP05451 166 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 CD28P10747 220 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 CD79AP11912 226 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 PTHLHP12272 177 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 CD36P16671 472 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 ORM2P19652 201 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 REG1BP48304 166 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 MARCKSL1P49006 195 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 SNAP25P60880 206 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 MMDQ15546 238 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 TMEM97Q5BJF2 176 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 ZNF101Q8IZC7 436 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 OR6V1Q8N148 313 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 C1orf158Q8N1D5 194 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 UBL4BQ8N7F7 174 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 TMEM75Q8N9X5 138 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 Q8WTZ3 238 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 TRIB3Q96RU7 358 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 MED18Q9BUE0 208 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 GNB1LQ9BYB4 327 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 S4R3C0 116 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 V9GYQ6 96 aa3.1□□□□□ -1.91
SMC5-203ENST00000475540 A0A1B0GV50 99 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 DISC1C4P0D8 188 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 K7ERS5 55 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 CNIH1O95406 144 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 HAND1O96004 215 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 S100A2P29034 98 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 GNG10P50151 68 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 CDK9P50750 372 aaKnown RBP3.09□□□□□ -1.91
SMC5-203ENST00000475540 IFITM2Q01629 132 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 TAF1AQ15573 450 aaPredicted RBP3.09□□□□□ -1.91
SMC5-203ENST00000475540 ACSBG2Q5FVE4 666 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 EBLN2Q6P2I7 272 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 HIST2H3AQ71DI3 136 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 ZNF550Q7Z398 422 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 TMEM86BQ8N661 226 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 FER1L6-AS1Q8NA97 138 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 OR51D1Q8NGF3 324 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 ITLN2Q8WWU7 325 aaPredicted RBP3.09□□□□□ -1.91
SMC5-203ENST00000475540 DIRAS2Q96HU8 199 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 OR2V2Q96R30 315 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 OR52E6Q96RD3 313 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 MED28Q9H204 178 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 C11orf49Q9H6J7 331 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 FAM60AQ9NP50 221 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 FIS1Q9Y3D6 152 aa3.09□□□□□ -1.91
SMC5-203ENST00000475540 PCYT1BQ9Y5K3 369 aaPredicted RBP3.09□□□□□ -1.91
SMC5-203ENST00000475540 MYO5BQ9ULV0 1848 aa3.09□□□□□ -1.92
SMC5-203ENST00000475540 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
SMC5-203ENST00000475540 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 IZUMO1RA6ND01 250 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 TMEM238C9JI98 176 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 OR2B3O76000 313 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 NRASP01111 189 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 HRASP01112 189 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 KRASP01116 189 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 IGHV1-46P01743 117 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 NTF3P20783 257 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 G0S2P27469 103 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 HSPA9P38646 679 aaKnown RBP3.08□□□□□ -1.92
SMC5-203ENST00000475540 ZCWPW2Q504Y3 356 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 HACD4Q5VWC8 232 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 LAIR2Q6ISS4 152 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 LRP11Q86VZ4 500 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 ZNF567Q8N184 647 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 YIPF7Q8N8F6 280 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 SPANXA2-OT1Q8N9U9 137 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 OR8S1Q8NH09 359 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 DCUN1D1Q96GG9 259 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 ABHD14BQ96IU4 210 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 BTF3L4Q96K17 158 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 PHB2Q99623 299 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 PRRT1Q99946 306 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 ZNF492Q9P255 531 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 DNAJC12Q9UKB3 198 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 KIF15Q9NS87 1388 aa3.08□□□□□ -1.92
SMC5-203ENST00000475540 A8MUU9 505 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 LEUTXA8MZ59 168 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 NOS1APO75052 506 aaPredicted RBP3.07□□□□□ -1.92
SMC5-203ENST00000475540 DEDDO75618 318 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 STK16O75716 305 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 MPV17P39210 176 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 OR1E2P47887 323 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms