RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 LPAR2Q9HBW0 351 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 ANKRD11Q6UB99 2663 aaPredicted RBP11.82□□□□□ -0.52
GPC1-208ENST00000469694 MPPED1O15442 326 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SYNGR3O43761 229 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 ANGPTL7O43827 346 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SYNGR4O95473 234 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 CCL2P13500 99 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 BRS3P32247 399 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 GNG10P50151 68 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SRPXP78539 464 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 NUFIP2Q7Z417 695 aaKnown RBP11.82□□□□□ -0.52
GPC1-208ENST00000469694 SPIN2AQ99865 258 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SPIN2BQ9BPZ2 258 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 TMEM222Q9H0R3 208 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SHANK1Q9Y566 2161 aa11.82□□□□□ -0.52
GPC1-208ENST00000469694 SPINK2P20155 84 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
GPC1-208ENST00000469694 SOX8P57073 446 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 ARF1P84077 181 aaKnown RBP11.81□□□□□ -0.52
GPC1-208ENST00000469694 ID3Q02535 119 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 IL24Q13007 206 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 PRSS8Q16651 343 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 DYRK2Q92630 601 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 OR5B12Q96R08 314 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
GPC1-208ENST00000469694 Q9N2K0 584 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 ZNF503-AS2A6NEH8 195 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 HLA-HP01893 362 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 CTSSP25774 331 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 ZNF726P1Q15940 193 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 AGMATQ9BSE5 352 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
GPC1-208ENST00000469694 TMEM56-RWDD3S4R434 201 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 APC2O95996 2303 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 H7BYZ3 331 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 IGLV3-1P01715 115 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 LCATP04180 440 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 CRYGSP22914 178 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 FGF8P55075 233 aaPredicted RBP11.81□□□□□ -0.52
GPC1-208ENST00000469694 PDCD1Q15116 288 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 MRGPRGQ86SM5 289 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 ZNF695Q8IW36 515 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 OR1F12Q8NHA8 337 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 WFIKKN1Q96NZ8 548 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 WNT5BQ9H1J7 359 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
GPC1-208ENST00000469694 IGKV3D-15A0A087WSY6 115 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 TRGV5A0A0B4J1U4 118 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 ADAM20O43506 726 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 CHST1O43916 411 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 CCNOP22674 350 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 CPEB3Q8NE35 698 aaKnown RBP11.8□□□□□ -0.52
GPC1-208ENST00000469694 SPTSSAQ969W0 71 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 ELOVL1Q9BW60 279 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 OR2H1Q9GZK4 316 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 RP1L1Q8IWN7 2480 aaPredicted RBP11.8□□□□□ -0.52
GPC1-208ENST00000469694 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 SPRY1O43609 319 aaPredicted RBP11.8□□□□□ -0.52
GPC1-208ENST00000469694 HRASP01112 189 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 SELEP16581 610 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 AADACP22760 399 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 CNN1P51911 297 aaKnown RBP11.8□□□□□ -0.52
GPC1-208ENST00000469694 RIPPLY2Q5TAB7 128 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 SELENOHQ8IZQ5 122 aaKnown RBP11.8□□□□□ -0.52
GPC1-208ENST00000469694 TMEM178AQ8NBL3 297 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 PP6455Q8WZ26 134 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 VSIRQ9H7M9 311 aa11.8□□□□□ -0.52
GPC1-208ENST00000469694 CLEC18AA5D8T8 446 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 WNT5AP41221 380 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 NPBWR2P48146 333 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 PAX9P55771 341 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
GPC1-208ENST00000469694 PRDX4Q13162 271 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 CISD2Q8N5K1 135 aaKnown RBP11.79□□□□□ -0.52
GPC1-208ENST00000469694 CLEC18CQ8NCF0 446 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 WDYHV1Q96HA8 205 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 MIEN1Q9BRT3 115 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
GPC1-208ENST00000469694 DHRS3O75911 302 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 IFNA5P01569 189 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 TYMSP04818 313 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 HERV-K104P61576 105 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 RBKSQ9H477 322 aa11.79□□□□□ -0.52
GPC1-208ENST00000469694 ZNF705FA8MVS1 300 aaPredicted RBP11.78□□□□□ -0.52
GPC1-208ENST00000469694 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
GPC1-208ENST00000469694 IL6RP08887 468 aaPredicted RBP11.78□□□□□ -0.52
GPC1-208ENST00000469694 ZNF705DP0CH99 300 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms