RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TMEM128Q5BJH2 165 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 IGSF11Q5DX21 431 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 WDR25Q64LD2 544 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 LYPD2Q6UXB3 125 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 HEPN1Q6WQI6 88 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 GLDNQ6ZMI3 551 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 SLC38A6Q8IZM9 456 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 LINC00311Q8N616 119 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 TCTEX1D1Q8N7M0 179 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 OR8B3Q8NGG8 313 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 OR13A1Q8NGR1 328 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 OR10J5Q8NHC4 309 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 TNFRSF14Q92956 283 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 ARL11Q969Q4 196 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 UPRTQ96BW1 309 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 GALNT14Q96FL9 552 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 OR8B2Q96RD0 313 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CCL19Q99731 98 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 ZNF2Q9BSG1 426 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 RTBDNQ9BSG5 229 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 C20orf85Q9H1P6 137 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 MMP28Q9H239 520 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 LIME1Q9H400 295 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 GPN1Q9HCN4 374 aaPredicted RBP4.5□□□□□ -1.69
VPS41-211ENST00000466017 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 CTSZQ9UBR2 303 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 ZNF221Q9UK13 617 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 DOCK11Q5JSL3 2073 aa4.5□□□□□ -1.69
VPS41-211ENST00000466017 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF462Q96JM2 2506 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 LYNX1G3V0Z9 82 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 GPR31O00270 319 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 HSPB6O14558 160 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ARPC1BO15143 372 aaKnown RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 PPIHO43447 177 aaKnown RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 NDUFS7O75251 213 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 IGHV4-39P01824 125 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 OR4E1P0C645 316 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF728P0DKX0 622 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 LYNX1P0DP58 116 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 RPS2P15880 293 aaKnown RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 SLC25A16P16260 332 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 IL2RGP31785 369 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 CEACAM6P40199 344 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 RAB7AP51149 207 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 LUMP51884 338 aaPredicted RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 RAB25P57735 213 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 LMO4P61968 165 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 RPL31P62899 125 aaKnown RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 TATDN3Q17R31 274 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 SCGB2B2Q4G0G5 96 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 MORN2Q502X0 79 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF626Q68DY1 528 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 FAAP20Q6NZ36 180 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF66Q6ZN08 573 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 TCF23Q7RTU1 214 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 CADM3Q8N126 398 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 C11orf42Q8N5U0 333 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 FAM216BQ8N7L0 139 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 LRTM2Q8N967 370 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 OR10V1Q8NGI7 309 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 OR1L1Q8NH94 360 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 MARCH1Q8TCQ1 289 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 MRGPRDQ8TDS7 321 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 C10orf105Q8TEF2 133 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 ZNF431Q8TF32 576 aaPredicted RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 MAFIPQ8WZ33 124 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 GAL3ST2Q9H3Q3 398 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 C5orf66Q9H5L9 145 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 NUDT15Q9NV35 164 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 CALYQ9NYX4 217 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 RPUSD1Q9UJJ7 312 aaKnown RBP4.49□□□□□ -1.69
VPS41-211ENST00000466017 VSIG4Q9Y279 399 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 KCNIP3Q9Y2W7 256 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
VPS41-211ENST00000466017 MALRD1Q5VYJ5 2156 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 TRAV6A0A075B6T7 132 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A0B4J293 547 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A1B0GVG6 124 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A1B0GW55 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 hCG_1809904A0A1W2PP81 198 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A1W2PPE2 198 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A1W2PR64 198 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A0A1W2PRV1 198 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 A1L4Q6 167 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 C9orf170A2RU37 121 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 FAM172BPA6NC97 362 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 CRYM-AS1A6NIL9 109 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 M0R1W7 72 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 FOXH1O75593 365 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 SFT2D2O95562 160 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUS4LO95620 317 aaKnown RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 IGHV2-5P01817 119 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L2P0CJ85 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L3P0CJ86 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L4P0CJ87 422 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L5P0CJ88 424 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms