RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FGF23Q9GZV9 251 aaPredicted RBP16.73■□□□□ 0.27
SDF4-205ENST00000465727 GOLT1BQ9Y3E0 138 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 CBY1Q9Y3M2 126 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 PDE6DO43924 150 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 LINC00614P0C842 121 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 CARD18P57730 90 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 ZNF585BQ52M93 769 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 MRPL14Q6P1L8 145 aaKnown RBP16.73■□□□□ 0.27
SDF4-205ENST00000465727 MOB1BQ7L9L4 216 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 C20orf144Q9BQM9 153 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 TMEM208Q9BTX3 173 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 SH2D2AQ9NP31 389 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 SERPINA7P05543 415 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 FAM78BQ5VT40 261 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 OR8G2PQ6IF36 304 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 LINC01551Q86U37 167 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 OR5A2Q8NGI9 324 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 OR1K1Q8NGR3 316 aa16.72■□□□□ 0.27
SDF4-205ENST00000465727 RNF212BA8MTL3 300 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 PAGE4O60829 102 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 CLDN1O95832 211 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 HPRT1P00492 218 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 SSR4P51571 173 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 RANP62826 216 aaKnown RBP16.71■□□□□ 0.27
SDF4-205ENST00000465727 CPEB3Q8NE35 698 aaKnown RBP16.71■□□□□ 0.27
SDF4-205ENST00000465727 CHODLQ9H9P2 273 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 HSPB7Q9UBY9 170 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 A0A0U1RQK1 487 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 ZNF320A2RRD8 509 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 RPL29P47914 159 aaKnown RBP16.71■□□□□ 0.27
SDF4-205ENST00000465727 PAFAH1B2P68402 229 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 PRSS8Q16651 343 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 FFAR4Q5NUL3 377 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 MRPL21Q7Z2W9 205 aaKnown RBP16.71■□□□□ 0.27
SDF4-205ENST00000465727 WDR54Q9H977 334 aa16.71■□□□□ 0.27
SDF4-205ENST00000465727 C11orf94C9JXX5 98 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 HMGB3O15347 200 aaKnown RBP16.7■□□□□ 0.26
SDF4-205ENST00000465727 LILRA1O75019 489 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 TMEM249Q2WGJ8 235 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 IL1F10Q8WWZ1 152 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 TBX15Q96SF7 602 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 PPP1R3CQ9UQK1 317 aa16.7■□□□□ 0.26
SDF4-205ENST00000465727 TRAV24A0A0B4J272 114 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 ZNF705FA8MVS1 300 aaPredicted RBP16.69■□□□□ 0.26
SDF4-205ENST00000465727 ZNF705DP0CH99 300 aaPredicted RBP16.69■□□□□ 0.26
SDF4-205ENST00000465727 ZNF705BP0CI00 300 aaPredicted RBP16.69■□□□□ 0.26
SDF4-205ENST00000465727 CHRNA7P36544 502 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 SOX8P57073 446 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 B3GALT5-AS1P59052 145 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 CCL7P80098 99 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 GATAD1Q8WUU5 269 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 MIEN1Q9BRT3 115 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 TMEM106BQ9NUM4 274 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 OR1A1Q9P1Q5 309 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 IGHV1-45A0A0A0MS14 117 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 TNFSF13O75888 250 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 SRD5A2P31213 254 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 YPEL3P61236 119 aaPredicted RBP16.69■□□□□ 0.26
SDF4-205ENST00000465727 MSMO1Q15800 293 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 ZNF705AQ6ZN79 300 aaPredicted RBP16.69■□□□□ 0.26
SDF4-205ENST00000465727 TEX43Q6ZNM6 134 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 GGNQ86UU5 652 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 TMEM256Q8N2U0 113 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 FGFRL1Q8N441 504 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 ZNF709Q8N972 641 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 CMTM2Q8TAZ6 248 aa16.69■□□□□ 0.26
SDF4-205ENST00000465727 C17orf112F2Z3M2 114 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 HS3ST1O14792 307 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 SYNGR4O95473 234 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 OR10P1Q8NGE3 313 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 RDH5Q92781 318 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 THOC3Q96J01 351 aaKnown RBP16.68■□□□□ 0.26
SDF4-205ENST00000465727 NPCDR1Q9BY65 106 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 DLL3Q9NYJ7 618 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 RBM7Q9Y580 266 aaKnown RBP16.68■□□□□ 0.26
SDF4-205ENST00000465727 F6UZH7 168 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 G3V3Y1 287 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 SYNGR1O43759 233 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 YPEL1O60688 119 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 ESDP10768 282 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 ZNF16P17020 682 aaPredicted RBP16.68■□□□□ 0.26
SDF4-205ENST00000465727 GCH1P30793 250 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 TPPP2P59282 170 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 SELENOTP62341 195 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 TLE1Q04724 770 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 VWC2Q2TAL6 325 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 APOBEC3DQ96AK3 386 aaPredicted RBP16.68■□□□□ 0.26
SDF4-205ENST00000465727 IMMP1LQ96LU5 166 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 YPEL2Q96QA6 119 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 DIRC2Q96SL1 478 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 ELOVL5Q9NYP7 299 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 KCNS2Q9ULS6 477 aa16.68■□□□□ 0.26
SDF4-205ENST00000465727 CNTRLQ7Z7A1 2325 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 SOX15O60248 233 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 CELA2AP08217 269 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 NPPCP23582 126 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 FAM58AQ8N1B3 248 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 OR5P3Q8WZ94 311 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 WFIKKN1Q96NZ8 548 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 TXNDC17Q9BRA2 123 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms