RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 THNSL2Q86YJ6 484 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 LAX1Q8IWV1 398 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 DRAM1Q8N682 238 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 OR56B4Q8NH76 319 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 DGCR14Q96DF8 476 aaKnown RBP15.93■□□□□ 0.14
COL9A3-204ENST00000463487 DCUN1D5Q9BTE7 237 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 TOLLIPQ9H0E2 274 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 IFI27L2Q9H2X8 130 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 NECAP2Q9NVZ3 263 aa15.93■□□□□ 0.14
COL9A3-204ENST00000463487 SAA2-SAA4A0A096LPE2 208 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 HLA-DQB1P01920 261 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 SAA2P0DJI9 122 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-204ENST00000463487 HKR1P10072 659 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 GPR12P47775 334 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 FOXL1Q12952 345 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 HES1Q14469 280 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 PIFOQ8TCI5 191 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 NPFFR1Q9GZQ6 430 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 C11orf54Q9H0W9 315 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-204ENST00000463487 ATRQ13535 2644 aa15.92■□□□□ 0.14
COL9A3-204ENST00000463487 A6NDX4 124 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 CTDSP2O14595 271 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 PTHLHP12272 177 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 S100A5P33763 92 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 TAS2R46P59540 309 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 MRPS10P82664 201 aaKnown RBP15.91■□□□□ 0.14
COL9A3-204ENST00000463487 DIAPH2-AS1Q14236 149 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 ZNF833PQ6ZTB9 187 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 H1FOOQ8IZA3 346 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-204ENST00000463487 GVQW1Q8N7I0 195 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-204ENST00000463487 OR4C13Q8NGP0 309 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 OR4F5Q8NH21 305 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 DIRAS2Q96HU8 199 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 MMP27Q9H306 513 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 A3GALT2U3KPV4 340 aa15.91■□□□□ 0.14
COL9A3-204ENST00000463487 IGKV1D-8A0A087WSZ0 117 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 A0A1B0GUS0 222 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 MEIS3P1A6NDR6 274 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 NDUFA7O95182 113 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 SNRNP70P08621 437 aaKnown RBP15.9■□□□□ 0.14
COL9A3-204ENST00000463487 OR3A3P47888 321 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 HABP2Q14520 560 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-204ENST00000463487 ODF3L1Q8IXM7 274 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 OR5AP2Q8NGF4 316 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 AGMATQ9BSE5 352 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 MIXL1Q9H2W2 232 aa15.9■□□□□ 0.14
COL9A3-204ENST00000463487 RANBP3Q9H6Z4 567 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-204ENST00000463487 TMEM89A2RUT3 159 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 DPPA5A6NC42 116 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 M0QZK8 103 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 SLC22A5O76082 557 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 OR8U9P0C7N5 309 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 TMEM11P17152 192 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 CD1BP29016 333 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 RCVRNP35243 200 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 RAG2P55895 527 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 ACTBP60709 375 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 CDK10Q15131 360 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 TMEM219Q86XT9 240 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 OR2T10Q8NGZ9 312 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 OR8U1Q8NH10 309 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 GPX8Q8TED1 209 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 FCAMRQ8WWV6 532 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 CFHR4Q92496 578 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 ABHD14BQ96IU4 210 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 NXF2Q9GZY0 626 aaKnown RBP15.89■□□□□ 0.13
COL9A3-204ENST00000463487 PARP12Q9H0J9 701 aaKnown RBP15.89■□□□□ 0.13
COL9A3-204ENST00000463487 OR2D2Q9H210 308 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 C1RLQ9NZP8 487 aa15.89■□□□□ 0.13
COL9A3-204ENST00000463487 FAM90A9PA6NNJ1 464 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 OR2F2O95006 317 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 IGKV1D-33P01593 117 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 IGKV1-33P01594 117 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 CD24P25063 80 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 LUMP51884 338 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-204ENST00000463487 IL18Q14116 193 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 PYHIN1Q6K0P9 492 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 OR5H2Q8NGV7 314 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 RBM14Q96PK6 669 aaKnown RBP15.88■□□□□ 0.13
COL9A3-204ENST00000463487 MDFIQ99750 246 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 SLC25A33Q9BSK2 321 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 BEX1Q9HBH7 125 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 RNF150Q9ULK6 438 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 ANAPC10Q9UM13 185 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 OR2W1Q9Y3N9 320 aa15.88■□□□□ 0.13
COL9A3-204ENST00000463487 MOSP00540 346 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 FCER2P06734 321 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 OR5H8P0DN80 308 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 NAT1P18440 290 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 MC5RP33032 325 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 LSAMPQ13449 338 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 SNAPC3Q92966 411 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 MRPL20Q9BYC9 149 aaKnown RBP15.87■□□□□ 0.13
COL9A3-204ENST00000463487 GAB2Q9UQC2 676 aa15.87■□□□□ 0.13
COL9A3-204ENST00000463487 IGHV3-72A0A0B4J1Y9 119 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 OR5H14A6NHG9 310 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 CHST1O43916 411 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 RBBP9O75884 186 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 NFYAP23511 347 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms