RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SETD6Q8TBK2 473 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 IL1F10Q8WWZ1 152 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 EDARADDQ8WWZ3 215 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 FAM3DQ96BQ1 224 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 KCTD7Q96MP8 289 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 GFI1Q99684 422 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 HSPB9Q9BQS6 159 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 NICN1Q9BSH3 213 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 MRPL20Q9BYC9 149 aaKnown RBP5.71□□□□□ -1.5
PTPRF-210ENST00000463041 Q9N2K0 584 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 KIAA1456Q9P272 454 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF107Q9UII5 783 aaPredicted RBP5.71□□□□□ -1.5
PTPRF-210ENST00000463041 AK3Q9UIJ7 227 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 RAB22AQ9UL26 194 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 BLOC1S6Q9UL45 172 aa5.71□□□□□ -1.5
PTPRF-210ENST00000463041 SAA2-SAA4A0A096LPE2 208 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 TRAV1-2A0A0B4J238 106 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 FOXI3A8MTJ6 420 aaPredicted RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 K7EIL1 84 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 PDCD5O14737 125 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 LDLRAD4O15165 306 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 NBR2O15453 112 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 HSPA12AO43301 675 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 DENRO43583 198 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 MRPS14O60783 128 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 RAMP3O60896 148 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 RBBP9O75884 186 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 NDUFA3O95167 84 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 HLA-DRB1P01911 266 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 GSTP1P09211 210 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 SAA2P0DJI9 122 aaPredicted RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CT45A6P0DMU7 189 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CT45A5P0DMU8 189 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CT45A7P0DMV0 189 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 GALP22466 123 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 PSMB8P28062 276 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 PPIFP30405 207 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 MAP2K4P45985 399 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 VEGFCP49767 419 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 DCTN2Q13561 401 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 DEFB121Q5J5C9 76 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF660Q6AZW8 331 aaPredicted RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 TMEM65Q6PI78 240 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 LCNL1Q6ZST4 164 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 OR5AN1Q8NGI8 311 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 OR8U1Q8NH10 309 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 PTX4Q96A99 478 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 RAX2Q96IS3 184 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 ARHGAP5-AS1Q96IT6 56 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CYYR1Q96J86 154 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 RITA1Q96K30 269 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 UBE2E2Q96LR5 201 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CMSS1Q9BQ75 279 aaKnown RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 AGMATQ9BSE5 352 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 CENPOQ9BU64 300 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 PECRQ9BY49 303 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 C11orf54Q9H0W9 315 aaPredicted RBP5.7□□□□□ -1.5
PTPRF-210ENST00000463041 IFI27L2Q9H2X8 130 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 OR51J1Q9H342 316 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 RAB26Q9ULW5 256 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 GAB2Q9UQC2 676 aa5.7□□□□□ -1.5
PTPRF-210ENST00000463041 IGHV7-81A0A0B4J1V7 117 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TRDV1A0A1B0GX56 115 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 WI2-2373I1.2A0A1W2PRP0 233 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 OR5H14A6NHG9 310 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TRDCB7Z8K6 153 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 RRHO14718 337 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 ST8SIA5O15466 376 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 IGLV1-40P01703 118 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 SCTP09683 121 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 SLC2A2P11168 524 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 CNTFRP26992 372 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 HOXD3P31249 432 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 SERPINB10P48595 397 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 RAB9AP51151 201 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 CLDN12P56749 244 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 HLA-DRB3P79483 266 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 MRPS15P82914 257 aaKnown RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 DGCR2P98153 550 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 RUNX1Q01196 453 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TMEM267Q0VDI3 215 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 KIAA0141Q14154 515 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TBCEQ15813 527 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 CD200R1LQ6Q8B3 271 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 IZUMO2Q6UXV1 221 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF367Q7RTV3 350 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF491Q8N8L2 437 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 MINDY2Q8NBR6 621 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 OR5M8Q8NGP6 311 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 MYOZ3Q8TDC0 251 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 ABHD14BQ96IU4 210 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 CNBD2Q96M20 576 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 HDHD3Q9BSH5 251 aaPredicted RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 YTHDF1Q9BYJ9 559 aaKnown RBP5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TOLLIPQ9H0E2 274 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 KCNK15Q9H427 330 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 C12orf4Q9NQ89 552 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF221Q9UK13 617 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms