RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR2S2Q9NQN1 319 aa7.42□□□□□ -1.22
VPS50-207ENST00000458530 LIN7CQ9NUP9 197 aaKnown RBP7.42□□□□□ -1.22
VPS50-207ENST00000458530 CALYQ9NYX4 217 aa7.42□□□□□ -1.22
VPS50-207ENST00000458530 GNG12Q9UBI6 72 aa7.42□□□□□ -1.22
VPS50-207ENST00000458530 MIOXQ9UGB7 285 aa7.42□□□□□ -1.22
VPS50-207ENST00000458530 TRAV39A0A0B4J263 110 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 C3orf85A0A1B0GTC6 90 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 C5orf51A6NDU8 294 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 DBX1A6NMT0 343 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 H0Y980 276 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 F2RL2O00254 374 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 ITGB1BP1O14713 200 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 MPPED1O15442 326 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 PHF1O43189 567 aaPredicted RBP7.41□□□□□ -1.22
VPS50-207ENST00000458530 YPEL1O60688 119 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 ZNF205O95201 554 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 IGHV2-70P01814 119 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 DAOP14920 347 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 RPS2P15880 293 aaKnown RBP7.41□□□□□ -1.22
VPS50-207ENST00000458530 GNRHRP30968 328 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 GZMKP49863 264 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 RPL31P62899 125 aaKnown RBP7.41□□□□□ -1.22
VPS50-207ENST00000458530 SUPT4H1P63272 117 aaKnown RBP7.41□□□□□ -1.22
VPS50-207ENST00000458530 SRSF4Q08170 494 aaKnown RBP7.41□□□□□ -1.22
VPS50-207ENST00000458530 TMEM155Q4W5P6 130 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 LY6G6FQ5SQ64 297 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 ZNF645Q8N7E2 425 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 TCTEX1D1Q8N7M0 179 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 LRTM2Q8N967 370 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 OR8B3Q8NGG8 313 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 OR52M1Q8NGK5 317 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 YPEL2Q96QA6 119 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 OR8B2Q96RD0 313 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 SPIN2AQ99865 258 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 SPIN2BQ9BPZ2 258 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 TMEM246Q9BRR3 403 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 ZFP57Q9NU63 452 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 OR1A1Q9P1Q5 309 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 LAMP3Q9UQV4 416 aa7.41□□□□□ -1.22
VPS50-207ENST00000458530 SONP18583 2426 aaKnown RBP7.4□□□□□ -1.22
VPS50-207ENST00000458530 IGKV1D-13A0A0B4J2D9 117 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 KBTBD11-OT1A0A1B0GTJ5 212 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 C15orf65H3BRN8 121 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 HSD17B6O14756 317 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 RP2O75695 350 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 ATG12O94817 140 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 LY6G6DO95868 133 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 CD8AP01732 235 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 TFF1P04155 84 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 SOD3P08294 240 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 OR5AC1P0C628 307 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 IGKV1-13P0DP09 117 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 SSTR5P35346 364 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 EFNA4P52798 201 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 TMEM33P57088 247 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 HOXA4Q00056 320 aaPredicted RBP7.4□□□□□ -1.22
VPS50-207ENST00000458530 Q3ZCU0 254 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 ESCO2Q56NI9 601 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 ZNF818PQ6ZRF7 136 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 TBC1D26Q86UD7 250 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 LDLRAD3Q86YD5 345 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 TPRX1Q8N7U7 411 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 DRAXINQ8NBI3 349 aaPredicted RBP7.4□□□□□ -1.22
VPS50-207ENST00000458530 H1FXQ92522 213 aaKnown RBP7.4□□□□□ -1.22
VPS50-207ENST00000458530 NMES1Q9C002 83 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 PLEKHF2Q9H8W4 249 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 LINC00574Q9H8X3 128 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 CCL28Q9NRJ3 127 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 DCAF16Q9NXF7 216 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 IDI2-AS1Q9NZ38 188 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 CLN8Q9UBY8 286 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 TMED3Q9Y3Q3 217 aa7.4□□□□□ -1.22
VPS50-207ENST00000458530 C13orf42A0A1B0GVH6 325 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 hCG_1809904A0A1W2PP81 198 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 A0A1W2PPE2 198 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 A0A1W2PR64 198 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 A0A1W2PRV1 198 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 DVL1O14640 695 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 PPIHO43447 177 aaKnown RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 SERPINE2P07093 398 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 OR8U9P0C7N5 309 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 SELLP14151 372 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 RPA2P15927 270 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 F2RP25116 425 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 GPR12P47775 334 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 H2BFSP57053 126 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 TMEM187Q14656 261 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 ANKRD55Q3KP44 614 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 THOC7Q6I9Y2 204 aaKnown RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 ZNF695Q8IW36 515 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 OR52L2PQ8NGH6 319 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 OR8U1Q8NH10 309 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms