RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PAFAH1B2P68402 229 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 PEAR1Q5VY43 1037 aaPredicted RBP17.02■□□□□ 0.31
SNX27-204ENST00000458013 CCL27Q9Y4X3 112 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 C19orf54Q5BKX5 351 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 TLNRD1Q9H1K6 362 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 A0A0J9YW62 118 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 NUDT3O95989 172 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 PRF1P14222 555 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 ZFP30Q9Y2G7 519 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 CTXND1A0A1B0GTU2 59 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 KBTBD11O94819 623 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 HOGA1Q86XE5 327 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 GMPPAQ96IJ6 420 aaPredicted RBP17.01■□□□□ 0.31
SNX27-204ENST00000458013 NUDT16L1Q9BRJ7 211 aaKnown RBP17.01■□□□□ 0.31
SNX27-204ENST00000458013 TSPAN2O60636 221 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 TNFSF18Q9UNG2 199 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 UCP2P55851 309 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 CXorf66Q5JRM2 361 aaPredicted RBP17.01■□□□□ 0.31
SNX27-204ENST00000458013 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
SNX27-204ENST00000458013 BEX4Q9NWD9 120 aaPredicted RBP17.01■□□□□ 0.31
SNX27-204ENST00000458013 TMEM210A6NLX4 147 aa17■□□□□ 0.31
SNX27-204ENST00000458013 HYPMO75409 117 aa17■□□□□ 0.31
SNX27-204ENST00000458013 STXBP6Q8NFX7 210 aa17■□□□□ 0.31
SNX27-204ENST00000458013 MIEN1Q9BRT3 115 aa17■□□□□ 0.31
SNX27-204ENST00000458013 C1RLQ9NZP8 487 aa17■□□□□ 0.31
SNX27-204ENST00000458013 IGHV1-45A0A0A0MS14 117 aa17■□□□□ 0.31
SNX27-204ENST00000458013 FAM181BA6NEQ2 426 aa17■□□□□ 0.31
SNX27-204ENST00000458013 MAS1LP35410 378 aa17■□□□□ 0.31
SNX27-204ENST00000458013 KIAA1644Q3SXP7 199 aa17■□□□□ 0.31
SNX27-204ENST00000458013 LOC101059948A0A1B0GTJ6 334 aa17■□□□□ 0.31
SNX27-204ENST00000458013 SMAD7O15105 426 aaKnown RBP17■□□□□ 0.31
SNX27-204ENST00000458013 FAM53AQ6NSI3 398 aaPredicted RBP17■□□□□ 0.31
SNX27-204ENST00000458013 ZNF638Q14966 1978 aaKnown RBP17■□□□□ 0.31
SNX27-204ENST00000458013 TMEM229AB2RXF0 380 aa17■□□□□ 0.31
SNX27-204ENST00000458013 FAM74A4Q5TZK3 123 aa17■□□□□ 0.31
SNX27-204ENST00000458013 IBA57Q5T440 356 aaKnown RBP17■□□□□ 0.31
SNX27-204ENST00000458013 AMMECR1LQ6DCA0 310 aa17■□□□□ 0.31
SNX27-204ENST00000458013 DMRTA2Q96SC8 542 aa17■□□□□ 0.31
SNX27-204ENST00000458013 SIRT7Q9NRC8 400 aa17■□□□□ 0.31
SNX27-204ENST00000458013 C17orf51A8MQB3 221 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 GPR6P46095 362 aaPredicted RBP16.99■□□□□ 0.31
SNX27-204ENST00000458013 ABLIM2Q6H8Q1 611 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 OR10J6PQ8NGY7 276 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 SURF2Q15527 256 aaPredicted RBP16.99■□□□□ 0.31
SNX27-204ENST00000458013 ZNF385CQ66K41 422 aaPredicted RBP16.99■□□□□ 0.31
SNX27-204ENST00000458013 ZNF645Q8N7E2 425 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 IGHV3OR16-13A0A075B7E8 117 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 IGHV3-74A0A0B4J1X5 117 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 C7orf71A4D174 169 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 LRRC75BQ2VPJ9 315 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 PRB4P10163 310 aaPredicted RBP16.99■□□□□ 0.31
SNX27-204ENST00000458013 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 GLI3P10071 1580 aa16.99■□□□□ 0.31
SNX27-204ENST00000458013 PGPA6NDG6 321 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 CKS2P33552 79 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 EBLN2Q6P2I7 272 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 LINC00869P0C866 280 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 C19orf48Q6RUI8 117 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 MUC21A0A0G2JKD1 596 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 MUC21A0A140T8X8 626 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 MUC21Q5SSG8 566 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 IRF3Q14653 427 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 INO80CQ6PI98 192 aaPredicted RBP16.98■□□□□ 0.31
SNX27-204ENST00000458013 HOXA6P31267 233 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 HOXC8P31273 242 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 HSPB7Q9UBY9 170 aa16.98■□□□□ 0.31
SNX27-204ENST00000458013 A0A1W2PPC1 479 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 C8orf82Q6P1X6 216 aaPredicted RBP16.97■□□□□ 0.31
SNX27-204ENST00000458013 IFITM3Q01628 133 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 ATG2BQ96BY7 2078 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 HPRT1P00492 218 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 ARL14EPLP0DKL9 152 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 PRB3Q04118 309 aaPredicted RBP16.97■□□□□ 0.31
SNX27-204ENST00000458013 TMEM78Q5T7P6 136 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 OR4A5Q8NH83 315 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 PRRC2BQ5JSZ5 2229 aaKnown RBP16.97■□□□□ 0.31
SNX27-204ENST00000458013 IGHV4-34P06331 123 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 HKR1P10072 659 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 IGKV1-8A0A0C4DH67 115 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 SS18L1O75177 396 aaPredicted RBP16.97■□□□□ 0.31
SNX27-204ENST00000458013 SOD3P08294 240 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 FAM209AQ5JX71 171 aa16.97■□□□□ 0.31
SNX27-204ENST00000458013 BCL2P10415 239 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 UNQ5815/PRO19632Q6UWF5 114 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 CARFQ8N187 725 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 TMEM171Q8WVE6 324 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 MRPL18Q9H0U6 180 aaKnown RBP16.96■□□□□ 0.31
SNX27-204ENST00000458013 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 CEACAM21Q3KPI0 293 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 C10orf35Q96D05 121 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 PTP4A3O75365 173 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 PITPNC1Q9UKF7 332 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 H0YL77 283 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 APCDD1LQ8NCL9 501 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 HIST1H4GQ99525 98 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 IL19Q9UHD0 177 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 IGHV3-49A0A0A0MS15 119 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 FAM74A7A6NL05 159 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 GAPDHP04406 335 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms