RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RPLP1P05386 114 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 GATA3P23771 443 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF83P51522 516 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 CNN1P51911 297 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 TLE3Q04726 772 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 RNF151Q2KHN1 245 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 C1orf174Q8IYL3 243 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 OCC1Q8TAD7 63 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 BAHD1Q8TBE0 780 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MRPL30Q8TCC3 161 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 C5orf30Q96GV9 206 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZFYVE21Q9BQ24 234 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 GNB4Q9HAV0 340 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF286AQ9HBT8 521 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 HES4Q9HCC6 221 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 A0A1W2PQF6 199 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 SNAPC5O75971 98 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 CA3P07451 260 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 MYF5P13349 255 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 DNASE1L1P49184 302 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 WBP2NLQ6ICG8 309 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 GAPTQ8N292 157 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 LINC00479Q96M42 142 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 TRIB1Q96RU8 372 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 CSTL1Q9H114 145 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PARD6AQ9NPB6 346 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF835Q9Y2P0 537 aa3.83□□□□□ -1.8
DEPDC1-202ENST00000456315 PPP5D1E7EU14 171 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 KBTBD11O94819 623 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OPN1MWP04001 364 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OPN1MW2P0DN77 364 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OPN1MW3P0DN78 364 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR10J1P30954 320 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 HMGN3Q15651 99 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 Q5PR19 223 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 C1orf185Q5T7R7 199 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 SLC35E4Q6ICL7 350 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 FAM122AQ96E09 287 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PGAM5Q96HS1 289 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 IGHV3-64DA0A0J9YX35 117 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF878C9JN71 531 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 BMPR1BO00238 502 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 MLNRO43193 412 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 BPNT1O95861 308 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ACRP10323 421 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 IGLV3-21P80748 117 aaPredicted RBP3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM196Q5HYL7 178 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 GRINAQ7Z429 371 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 MOB3BQ86TA1 216 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR2T10Q8NGZ9 312 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 TBL1XR1Q9BZK7 514 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 CST9LQ9H4G1 147 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 HRASLS2Q9NWW9 162 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 MMP17Q9ULZ9 603 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PPP1R3CQ9UQK1 317 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 COX11Q9Y6N1 276 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 IGHV5-51A0A0C4DH38 117 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 C2orf70A6NJV1 201 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 VSTM2BA6NLU5 285 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 H7BYZ3 331 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 HSPB6O14558 160 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 RPLP2P05387 115 aaKnown RBP3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PPIAL4GP0DN37 164 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 CSF2RAP15509 400 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 DLX2Q07687 328 aaPredicted RBP3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 FAM78BQ5VT40 261 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF709Q8N972 641 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 UCN2Q96RP3 112 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PLA2G2FQ9BZM2 168 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ZBP1Q9H171 429 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 C1orf123Q9NWV4 160 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 SLC45A2Q9UMX9 530 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 LYSTQ99698 3801 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 SLC22A20A6NK97 555 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 F5H5K5 113 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 NDUFB4O95168 129 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 TFF1P04155 84 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 TSPOP30536 169 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 RIPPLY3P57055 190 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR1D5P58170 312 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 LINC00696Q6ZRV3 163 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 AGBL5Q8NDL9 886 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR5D14Q8NGL3 314 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR14L1PQ8NHC6 308 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PINX1Q96BK5 328 aaKnown RBP3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR5B12Q96R08 314 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 LRFN3Q9BTN0 628 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 OR10A2Q9H208 303 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 PLSCR2Q9NRY7 297 aa3.82□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF705FA8MVS1 300 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 MPPED1O15442 326 aa3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 NUDT21O43809 227 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 PAGE4O60829 102 aa3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 DFFBO76075 338 aa3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 PPBPP02775 128 aa3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF705DP0CH99 300 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF705BP0CI00 300 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 IAPPP10997 89 aa3.81□□□□□ -1.8
DEPDC1-202ENST00000456315 UCP1P25874 307 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms