RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SRD5A3Q9H8P0 318 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 SLC35D1Q9NTN3 355 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 OCIAD1Q9NX40 245 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 FOXJ2Q9P0K8 574 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 PPIAL4AQ9Y536 164 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 PRUNE2Q8WUY3 3088 aa10.65□□□□□ -0.7
UBE3B-204ENST00000449510 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 LRP5LA4QPB2 252 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 HPRT1P00492 218 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 IGKV1D-12P01611 117 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 SUCLG1P53597 346 aaKnown RBP10.65□□□□□ -0.71
UBE3B-204ENST00000449510 FXYD3Q14802 87 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 ZNF573Q86YE8 665 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 OR2V1Q8NHB1 315 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 LRFN3Q9BTN0 628 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 ABCA4P78363 2273 aa10.65□□□□□ -0.71
UBE3B-204ENST00000449510 CHD7Q9P2D1 2997 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 CBR3O75828 277 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 CCL4P13236 92 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 SPINK14Q6IE38 97 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
UBE3B-204ENST00000449510 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 A0A0U1RQV5 110 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 RPL36A-HNRNPH2H7BZ11 118 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 TNFRSF9Q07011 255 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 Q56UQ5 140 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 C10orf91Q5T1B1 145 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 FBXO46Q6PJ61 603 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-204ENST00000449510 GALMQ96C23 342 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 TMEM68Q96MH6 324 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-204ENST00000449510 CLDN16Q9Y5I7 305 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 PIGBOS1A0A0B4J2F0 54 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 GZMBP10144 247 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 SELLP14151 372 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 CCKARP32238 428 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 DSCR4P56555 118 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-204ENST00000449510 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-204ENST00000449510 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 NHLRC2Q8NBF2 726 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 AGBL5Q8NDL9 886 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 OR2H1Q9GZK4 316 aa10.64□□□□□ -0.71
UBE3B-204ENST00000449510 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 SPINT2O43291 252 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 TIMM8AO60220 97 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-204ENST00000449510 TNFSF10P50591 281 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 RHBDD2Q6NTF9 364 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 ZDHHC16Q969W1 377 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 MRPL13Q9BYD1 178 aaKnown RBP10.63□□□□□ -0.71
UBE3B-204ENST00000449510 DENND4AQ7Z401 1863 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 A0A1B0GU03 582 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 M0R1X1 148 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 ZG16O60844 167 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 GCGP01275 180 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
UBE3B-204ENST00000449510 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 POC1BQ8TC44 478 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 NANOS1Q8WY41 292 aaKnown RBP10.63□□□□□ -0.71
UBE3B-204ENST00000449510 CDCA3Q99618 268 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-204ENST00000449510 ANGPTL4Q9BY76 406 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 PRDM13Q9H4Q3 707 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 SH2D1BO14796 132 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 C1QTNF9P0C862 333 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 GCH1P30793 250 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 GPR12P47775 334 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 NUBP1P53384 320 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 AESQ08117 197 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 GCSAMLQ5JQS6 135 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 OR8I2Q8N0Y5 310 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 OR4P4Q8NGL7 312 aa10.63□□□□□ -0.71
UBE3B-204ENST00000449510 PLXNB3Q9ULL4 1909 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 TMEM50AO95807 157 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 CSN3P07498 182 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 HOXA6P31267 233 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 PMELP40967 661 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 GNG3P63215 75 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 RABEPKQ7Z6M1 372 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 ZNF501Q96CX3 271 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-204ENST00000449510 TMEM38BQ9NVV0 291 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 SH3BGRL2Q9UJC5 107 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 RPL23P62829 140 aaKnown RBP10.62□□□□□ -0.71
UBE3B-204ENST00000449510 RAC1P63000 192 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 ARSJQ5FYB0 599 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-204ENST00000449510 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 FAM19A2Q8N3H0 131 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 FAM89BQ8N5H3 189 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 ACY3Q96HD9 319 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 ZNF552Q9H707 407 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-204ENST00000449510 FREM1Q5H8C1 2179 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 CTXND1A0A1B0GTU2 59 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 CXCL12P48061 93 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms