RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CLEC7AQ9BXN2 247 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 BEX2Q9BXY8 128 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 BEX1Q9HBH7 125 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 GPR12P47775 334 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 RAB7AP51149 207 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 ABCA11PQ4W5N1 156 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 SLC25A48Q6ZT89 311 aaKnown RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 OR9G1Q8NH87 305 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 LHX4Q969G2 390 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 SCGB3A2Q96PL1 93 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 C5orf66Q9H5L9 145 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 C7orf69Q9H7B7 122 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 HEXA-AS1Q9H8Q6 139 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 J3QR06 171 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 TNFSF12O43508 249 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 CD34P28906 385 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 GNRHRP30968 328 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 UCP3P55916 312 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 Q3ZCU0 254 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 LY6G6FQ5SQ64 297 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 CYB5R2Q6BCY4 276 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 ZNF645Q8N7E2 425 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 MINDY2Q8NBR6 621 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 ADAD2Q8NCV1 583 aaKnown RBP11.93□□□□□ -0.5
TNF-208ENST00000449264 ZFAND1Q8TCF1 268 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 TNFRSF14Q92956 283 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 RSRP1Q9BUV0 290 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 ZNF221Q9UK13 617 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 AUP1Q9Y679 476 aa11.93□□□□□ -0.5
TNF-208ENST00000449264 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 INMT-MINDY4F8WBC2 141 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 GPR31O00270 319 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 ITGB1BP1O14713 200 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 ARG1P05089 322 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
TNF-208ENST00000449264 SAA2P0DJI9 122 aaPredicted RBP11.92□□□□□ -0.5
TNF-208ENST00000449264 AKR1C4P17516 323 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 GATA3P23771 443 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 PIGPP57054 158 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 RPL39P5Q59GN2 51 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 NCR3LG1Q68D85 454 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 DRAM1Q8N682 238 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
TNF-208ENST00000449264 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
TNF-208ENST00000449264 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
TNF-208ENST00000449264 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 IGLV2-14P01704 120 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 PRRX1P54821 245 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 HLA-DRB5Q30154 266 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 CAPSLQ8WWF8 208 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 MARVELD1Q9BSK0 173 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 SDHAF2Q9NX18 166 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 RAB29O14966 203 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 PEX14O75381 377 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 ZNF626Q68DY1 528 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 ODF3L1Q8IXM7 274 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 C8orf31Q8N9H6 132 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 OR11H6Q8NGC7 330 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 TMEM230Q96A57 120 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
TNF-208ENST00000449264 PIPOXQ9P0Z9 390 aa11.91□□□□□ -0.5
TNF-208ENST00000449264 M0R1X1 148 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 SLC22A5O76082 557 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 IGLV1-47P01700 117 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 S100GP29377 79 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 BVESQ8NE79 360 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 OR4P4Q8NGL7 312 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
TNF-208ENST00000449264 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
TNF-208ENST00000449264 AMMECR1Q9Y4X0 333 aaPredicted RBP11.9□□□□□ -0.5
TNF-208ENST00000449264 TEX13DA0A0J9YY54 714 aaPredicted RBP11.89□□□□□ -0.51
TNF-208ENST00000449264 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 J3QLI3 93 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 VSIG10L2P0DP72 767 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 VAMP1P23763 118 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms