RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CXorf58Q96LI9 332 aa14.7□□□□□ -0.06
LMNA-208ENST00000448611 ZC4H2Q9NQZ6 224 aa14.7□□□□□ -0.06
LMNA-208ENST00000448611 DEFB108AA8MXU0 73 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 PITX3O75364 302 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 SLC25A6P12236 298 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 LOXL3P58215 753 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 ID3Q02535 119 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 MORN2Q502X0 79 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 CXorf66Q5JRM2 361 aaPredicted RBP14.69□□□□□ -0.06
LMNA-208ENST00000448611 ZNF843Q8N446 348 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 LSM10Q969L4 123 aaKnown RBP14.69□□□□□ -0.06
LMNA-208ENST00000448611 LRRC46Q96FV0 321 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 MS4A5Q9H3V2 200 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 DYNLRB1Q9NP97 96 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 MED9Q9NWA0 146 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 CALYQ9NYX4 217 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 PSG11Q9UQ72 335 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 RNF115Q9Y4L5 304 aa14.69□□□□□ -0.06
LMNA-208ENST00000448611 RAI1Q7Z5J4 1906 aaPredicted RBP14.69□□□□□ -0.06
LMNA-208ENST00000448611 A0A1B0GU03 582 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 TMEM178BH3BS89 294 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 LGALS8O00214 317 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 ST8SIA5O15466 376 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 GPR137BO60478 399 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 IGKV1-5P01602 117 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 TMEM33P57088 247 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 POLR2GP62487 172 aaKnown RBP eCLIP14.68□□□□□ -0.06
LMNA-208ENST00000448611 LTC4SQ16873 150 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 C17orf58Q2M2W7 97 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 PDZD9Q8IXQ8 264 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 ZNF808Q8N4W9 903 aaPredicted RBP14.68□□□□□ -0.06
LMNA-208ENST00000448611 KCNJ16Q9NPI9 418 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 FBXL17Q9UF56 701 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 B9A039 149 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 YPEL1O60688 119 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 RPL30P62888 115 aaKnown RBP14.68□□□□□ -0.06
LMNA-208ENST00000448611 GPR157Q5UAW9 335 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 TCF23Q7RTU1 214 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 C1orf87Q8N0U7 546 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 FAM216AQ8WUB2 273 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 EDARADDQ8WWZ3 215 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 YPEL2Q96QA6 119 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 SDHAF2Q9NX18 166 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 GNG12Q9UBI6 72 aa14.68□□□□□ -0.06
LMNA-208ENST00000448611 TRAV38-1A0A0B4J264 116 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 C1QL1O75973 258 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 TFF3Q07654 80 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 RPL7L1Q6DKI1 246 aaKnown RBP14.67□□□□□ -0.06
LMNA-208ENST00000448611 Q6ZRM9 215 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 TMEM106BQ9NUM4 274 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 CISD1Q9NZ45 108 aaKnown RBP14.67□□□□□ -0.06
LMNA-208ENST00000448611 CFAP46Q8IYW2 2715 aa14.67□□□□□ -0.06
LMNA-208ENST00000448611 KBTBD11-OT1A0A1B0GTJ5 212 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 KIAA1324LA8MWY0 1029 aaPredicted RBP14.66□□□□□ -0.06
LMNA-208ENST00000448611 EPHA1P21709 976 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 OMGP23515 440 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 LOXP28300 417 aaPredicted RBP14.66□□□□□ -0.06
LMNA-208ENST00000448611 BRWD1-AS2P59051 145 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 CATR1Q13166 79 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 BTNL3Q6UXE8 466 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 CCL17Q92583 94 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 BSCL2Q96G97 398 aaPredicted RBP14.66□□□□□ -0.06
LMNA-208ENST00000448611 MAGT1Q9H0U3 335 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 CLN8Q9UBY8 286 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 PPIAL4EA0A075B759 164 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 TRGV10A0A0A0MS01 117 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 NKX6-3A6NJ46 265 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 PPIAL4DF5H284 164 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 SSSCA1O60232 199 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 RAMP3O60896 148 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 GAPDHP04406 335 aaKnown RBP14.66□□□□□ -0.06
LMNA-208ENST00000448611 PPIAL4FP0DN26 164 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 LPAR6P43657 344 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 IZUMO4Q1ZYL8 232 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 SWI5Q1ZZU3 235 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 ZNF66Q6ZN08 573 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 FGFRL1Q8N441 504 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 REG4Q9BYZ8 158 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 PPIAL4AQ9Y536 164 aa14.66□□□□□ -0.06
LMNA-208ENST00000448611 NBASA2RRP1 2371 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 ROS1P08922 2347 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 TNFRSF13BO14836 293 aaPredicted RBP14.65□□□□□ -0.06
LMNA-208ENST00000448611 TMPRSS2O15393 492 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 CLDN1O95832 211 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 MMP9P14780 707 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 PVALBP20472 110 aaPredicted RBP14.65□□□□□ -0.06
LMNA-208ENST00000448611 ZNF134P52741 427 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 AKR1C2P52895 323 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 Q3ZCU0 254 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 CLEC9AQ6UXN8 241 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 OR2C3Q8N628 320 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 RNASE11Q8TAA1 199 aaKnown RBP14.65□□□□□ -0.06
LMNA-208ENST00000448611 CORO2AQ92828 525 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 TMEM204Q9BSN7 226 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 SMIM3Q9BZL3 60 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 RAB9BQ9NP90 201 aa14.65□□□□□ -0.06
LMNA-208ENST00000448611 FAM212BQ9NTI7 297 aaPredicted RBP14.65□□□□□ -0.06
LMNA-208ENST00000448611 PROP1O75360 226 aa14.64□□□□□ -0.07
LMNA-208ENST00000448611 CLDN14O95500 239 aa14.64□□□□□ -0.07
LMNA-208ENST00000448611 TMEM50AO95807 157 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms