RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NXF5Q9H1B4 397 aaKnown RBP16.39■□□□□ 0.21
HMGA1-205ENST00000447654 ASCC3Q8N3C0 2202 aaKnown RBP16.39■□□□□ 0.21
HMGA1-205ENST00000447654 PPYP01298 95 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 IGLV3-1P01715 115 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 SERPINA7P05543 415 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 OPRM1P35372 400 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 MUC15Q8N387 334 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 OR5D13Q8NGL4 314 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 SGMS2Q8NHU3 365 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 DYRK2Q92630 601 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 WDR61Q9GZS3 305 aaKnown RBP16.38■□□□□ 0.21
HMGA1-205ENST00000447654 ZNF430Q9H8G1 570 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-205ENST00000447654 MRPS17Q9Y2R5 130 aaKnown RBP16.38■□□□□ 0.21
HMGA1-205ENST00000447654 RRADP55042 308 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 C19orf35Q6ZS72 473 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 Q6ZSR3 168 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 TBC1D26Q86UD7 250 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 KIAA2026Q5HYC2 2103 aa16.38■□□□□ 0.21
HMGA1-205ENST00000447654 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 IGKV1D-43A0A0B4J1Z2 117 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 LOC102725191A0A1B0GVB3 256 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 PDE6DO43924 150 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 RAMP3O60896 148 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 CTXN2P0C2S0 81 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 FCGR2AP12318 317 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 PRRX1P54821 245 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 PRR22Q8IZ63 422 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 BCL2L2Q92843 193 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-205ENST00000447654 CHRNA10Q9GZZ6 450 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 ZNF160Q9HCG1 818 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 CUL9Q8IWT3 2517 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 IGKV3D-11A0A0A0MRZ8 115 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 MS4A18H0YCH9 400 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 K7ESF4 209 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 WISP1O95388 367 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 GRB2P62993 217 aaKnown RBP16.37■□□□□ 0.21
HMGA1-205ENST00000447654 MS4A18Q3C1V0 323 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 OR10J3Q5JRS4 329 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 ZNF468Q5VIY5 522 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-205ENST00000447654 RAET1LQ5VY80 246 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 SPEM1Q8N4L4 309 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-205ENST00000447654 NRN1Q9NPD7 142 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 TAAR3PQ9P1P4 343 aa16.37■□□□□ 0.21
HMGA1-205ENST00000447654 C17orf112F2Z3M2 114 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 TNFSF15O95150 251 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 HLA-DOBP13765 273 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 CTSSP25774 331 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 NIT1Q86X76 327 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 RPP25LQ8N5L8 163 aaKnown RBP16.36■□□□□ 0.21
HMGA1-205ENST00000447654 Q8NFD4 153 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 MAFAQ8NHW3 353 aaPredicted RBP16.36■□□□□ 0.21
HMGA1-205ENST00000447654 MRPL18Q9H0U6 180 aaKnown RBP16.36■□□□□ 0.21
HMGA1-205ENST00000447654 WNT16Q9UBV4 365 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 LHFPL6Q9Y693 200 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 SIRPB1O00241 398 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 IGKV3-11P04433 115 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 GNRHRP30968 328 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 PI4KAP42356 2102 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 TMEM211Q6ICI0 200 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 VWA1Q6PCB0 445 aa16.36■□□□□ 0.21
HMGA1-205ENST00000447654 PHF3Q92576 2039 aaKnown RBP16.35■□□□□ 0.21
HMGA1-205ENST00000447654 DPRXA6NFQ7 191 aa16.35■□□□□ 0.21
HMGA1-205ENST00000447654 DEGS1O15121 323 aa16.35■□□□□ 0.21
HMGA1-205ENST00000447654 TRAF3IP2O43734 574 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-205ENST00000447654 TESK1Q15569 626 aa16.35■□□□□ 0.21
HMGA1-205ENST00000447654 TAF15Q92804 592 aaKnown RBP eCLIP16.35■□□□□ 0.21
HMGA1-205ENST00000447654 SFRP2Q96HF1 295 aa16.35■□□□□ 0.21
HMGA1-205ENST00000447654 NUDT22Q9BRQ3 303 aa16.35■□□□□ 0.21
HMGA1-205ENST00000447654 TBL2Q9Y4P3 447 aaKnown RBP16.35■□□□□ 0.21
HMGA1-205ENST00000447654 FRG2CA6NGY1 282 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 BIDP55957 195 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 ARG2P78540 354 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 FAM71F2Q6NXP2 309 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 H1FNTQ75WM6 255 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-205ENST00000447654 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-205ENST00000447654 ZNF295-AS1Q8N0V1 137 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 ADIPOR1Q96A54 375 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 UHRF2Q96PU4 802 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 RNF24Q9Y225 148 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 MDFIC2A0A1B0GVS7 189 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 ALG1L2C9J202 215 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 H0Y980 276 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 DHRS3O75911 302 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 TMEM267Q0VDI3 215 aaPredicted RBP16.34■□□□□ 0.21
HMGA1-205ENST00000447654 SMIM21Q3B7S5 101 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 COX19Q49B96 90 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 Q6ZS49 121 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 KCNS1Q96KK3 526 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 POLR1DQ9Y2S0 133 aa16.34■□□□□ 0.21
HMGA1-205ENST00000447654 FREM2Q5SZK8 3169 aa16.33■□□□□ 0.21
HMGA1-205ENST00000447654 ZNF891A8MT65 544 aaPredicted RBP16.33■□□□□ 0.2
HMGA1-205ENST00000447654 KIAA1324LA8MWY0 1029 aaPredicted RBP16.33■□□□□ 0.2
HMGA1-205ENST00000447654 CORTO00230 105 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 TMEM249Q2WGJ8 235 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 SHISA6Q6ZSJ9 500 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 Q6ZVH6 145 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 TCF23Q7RTU1 214 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 OR4F17Q8NGA8 305 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 OR4P4Q8NGL7 312 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms