RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OR52D1Q9H346 318 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 Q9H3A6 140 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 ANKRD19PQ9H560 264 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 GSTK1Q9Y2Q3 226 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 V9GYS6 101 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 LPAP08519 4548 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 TRBV9A0A0B4J1U6 114 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 FAM230AA0A1W2PPH8 454 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 DHRS7CA6NNS2 312 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 GGCTO75223 188 aaKnown RBP2.25□□□□□ -2.05
PMS1-215ENST00000447232 OR2C1O95371 312 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 CLUP10909 449 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 ZNF44P15621 663 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 CRISP1P54107 249 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 MTPNP58546 118 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 EXOSC2Q13868 293 aaKnown RBP2.25□□□□□ -2.05
PMS1-215ENST00000447232 UBE2V2Q15819 145 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 SLC22A6Q4U2R8 563 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 TTC32Q5I0X7 151 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 AWAT2Q6E213 333 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 CYP4Z1Q86W10 505 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 ODF3L1Q8IXM7 274 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 ADAD2Q8NCV1 583 aaKnown RBP2.25□□□□□ -2.05
PMS1-215ENST00000447232 OR1L1Q8NH94 360 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 FANK1Q8TC84 345 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 GHSRQ92847 366 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 TMEM68Q96MH6 324 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 IFT27Q9BW83 186 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 TMEM120AQ9BXJ8 343 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 FNDC4Q9H6D8 234 aaPredicted RBP2.25□□□□□ -2.05
PMS1-215ENST00000447232 ZNF221Q9UK13 617 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 SAMD4AQ9UPU9 718 aaKnown RBP2.25□□□□□ -2.05
PMS1-215ENST00000447232 CDH10Q9Y6N8 788 aa2.25□□□□□ -2.05
PMS1-215ENST00000447232 TRAV39A0A0B4J263 110 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 IGKV1-12A0A0C4DH73 117 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OR4C46A6NHA9 309 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 A6NIN4 97 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 FAM223BA6NKX1 122 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 M0QYG6 137 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SDCBPO00560 298 aaPredicted RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 ZNF682O95780 498 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 CYB5AP00167 134 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 IGKV1D-12P01611 117 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 GYPBP06028 91 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SPI1P17947 270 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 FXYD3Q14802 87 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 FAM209BQ5JX69 171 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 ATAD3CQ5T2N8 411 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 LIPKQ5VXJ0 399 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OR4A47Q6IF82 309 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 TMEM88Q6PEY1 159 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 RRM2BQ7LG56 351 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 FAM223AQ8IWN6 122 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC37A3Q8NCC5 494 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OR6N2Q8NGY6 317 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 GRPEL2Q8TAA5 225 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 IFT81Q8WYA0 676 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SPDL1Q96EA4 605 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 INTS14Q96SY0 518 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 ATG101Q9BSB4 218 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 TXLNGYQ9BZA5 131 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 PBOV1Q9GZY1 135 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 Q9N2K0 584 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC2A9Q9NRM0 540 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 INTS9Q9NV88 658 aaKnown RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 MRPL27Q9P0M9 148 aaKnown RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 RCC2Q9P258 522 aaKnown RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 LINC00588Q9Y4M8 146 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 IGHV3-43A0A0B4J1X8 118 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 A0A1B0GTI1 187 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 A0A1W2PRQ8 180 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC22A1O15245 554 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC16A6O15403 523 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SPAG7O75391 227 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 KDM4BO94953 1096 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 TTRP02766 147 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 LYNP07948 512 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 IGHV3-43DP0DP04 118 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 H2AFXP16104 143 aaPredicted RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 HOXB6P17509 224 aaKnown RBP2.24□□□□□ -2.05
PMS1-215ENST00000447232 GZMHP20718 246 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 LGALS7P47929 136 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC1A6P48664 564 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 FUT6P51993 359 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 BLVRAP53004 296 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 ERVFC1-1P60608 527 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 RHOGP84095 191 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 MED21Q13503 144 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 DGCR6Q14129 220 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 PLGLAQ15195 96 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 CYBRD1Q53TN4 286 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 TMEM41BQ5BJD5 291 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SHFQ7M4L6 423 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 COMMD2Q86X83 199 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 SLC15A3Q8IY34 581 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 CSNK1G2-AS1Q8NCQ2 148 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OR6K6Q8NGW6 343 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OR10A6Q8NH74 314 aa2.24□□□□□ -2.05
PMS1-215ENST00000447232 OTOSQ8NHW6 89 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms