RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ACSM6Q6P461 480 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 NRIP2Q9BQI9 281 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 LYNX1G3V0Z9 82 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 LYNX1P0DP58 116 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 EFNA4P52798 201 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 ETFRF1Q6IPR1 90 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 Q9N2K0 584 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 RCL1Q9Y2P8 373 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 IGHV3-72A0A0B4J1Y9 119 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 BMI1P35226 326 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 IGSF11Q5DX21 431 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 STPG2Q8N412 459 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 PNKDQ8N490 385 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
SMARCA4-204ENST00000444061 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 RBP4P02753 201 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 F2RP25116 425 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 TMED6Q8WW62 240 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 C9orf170A2RU37 121 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 BPIFB3P59826 476 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 SSTP61278 116 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 ZNF260Q3ZCT1 412 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 LRP11Q86VZ4 500 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 FAM90A1Q86YD7 464 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 RGP1Q92546 391 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 C7orf69Q9H7B7 122 aa11.96□□□□□ -0.49
SMARCA4-204ENST00000444061 DPRXA6NFQ7 191 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 UMAD1C9J7I0 102 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 DVL1O14640 695 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 IGHV1-46P01743 117 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 DSCR9P59020 149 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 NCMAPQ5T1S8 102 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 RELL2Q8NC24 303 aaPredicted RBP11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 RAB18Q9NP72 206 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 OR2G3Q8NGZ4 309 aa11.96□□□□□ -0.5
SMARCA4-204ENST00000444061 PRB1P04280 392 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 CLEC3BP05452 202 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 SLC6A1P30531 599 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 SLC35E4Q6ICL7 350 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 RAB40CQ96S21 281 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 ARV1Q9H2C2 271 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 CADP27708 2225 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 PLXND1Q9Y4D7 1925 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 UTRNP46939 3433 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 F6UZH7 168 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 VDAC1P21796 283 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 CD200P41217 278 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 PLAURQ03405 335 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 GNPNAT1Q96EK6 184 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 FAM215AQ9Y5M1 114 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 PSG2P11465 335 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
SMARCA4-204ENST00000444061 TM4SF5O14894 197 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 TOX4O94842 621 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 MBNL2Q5VZF2 373 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 PQLC2LA1A4F0 135 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 CST7O76096 145 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 TAS2R45P59539 299 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 OR2B8PP59922 312 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 LILRB1Q8NHL6 650 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 GAR1Q9NY12 217 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF319Q9P2F9 582 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 V9GYH0 126 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 GTF3C1Q12789 2109 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 WDR31Q8NA23 367 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 NUP37Q8NFH4 326 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 TNFSF13O75888 250 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 TMEM11P17152 192 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 MEOX2P50222 304 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 ETV3LQ6ZN32 361 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 BVESQ8NE79 360 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 BORCS7Q96B45 105 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 WDR89Q96FK6 387 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 NXF2Q9GZY0 626 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
SMARCA4-204ENST00000444061 UQCRFS1P47985 274 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 HIST3H3Q16695 136 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 C11orf87Q6NUJ2 197 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF485Q8NCK3 441 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms