RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 RCC1LQ96I51 464 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 WDR61Q9GZS3 305 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 MBNL3Q9NUK0 354 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 RNF212BA8MTL3 300 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 RAB4BP61018 213 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 ERVK11-1P61568 191 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 FGFRL1Q8N441 504 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 DRAM1Q8N682 238 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 OR13D1Q8NGV5 346 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 C2orf88Q9BSF0 95 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 FAM90A26D6RGX4 464 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 J3QW42 95 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 CDIPTO14735 213 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 SH2D1BO14796 132 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 MRPL49Q13405 166 aaKnown RBP13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 LBHQ53QV2 105 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 FAM180AQ6UWF9 173 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 WIPI2Q9Y4P8 454 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 KNTC1P50748 2209 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 CLDN34H7C241 214 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BKO60814 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 CYB5R3P00387 301 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 TRGC2P03986 189 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BJP06899 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 ZNF883P0CG24 379 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BOP23527 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BBP33778 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BDP58876 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BCP62807 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 ZNF146Q15072 292 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST2H2BEQ16778 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 SSX7Q7RTT5 188 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 MRGPRGQ86SM5 289 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 CA5BP1Q8WTZ4 195 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BHQ93079 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 OR4C12Q96R67 309 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BNQ99877 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 HIST1H2BMQ99879 126 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 OR2J1Q9GZK6 312 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 VAX2Q9UIW0 290 aa13.93□□□□□ -0.18
SEMA3B-207ENST00000441915 A0A087X0M5 115 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 A0A1B0GX30 115 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 IFNA1P01562 189 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 PKIAP61925 76 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 PARD6GQ9BYG4 376 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 MAP1LC3B2A6NCE7 125 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 TCAPO15273 167 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 PGA5P0DJD9 388 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 UNQ6494/PRO21346Q6UXR6 183 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 TAF15Q92804 592 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 FAM210BQ96KR6 192 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 MAP1LC3BQ9GZQ8 125 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 SDF2L1Q9HCN8 221 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 KIAA2026Q5HYC2 2103 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 CEBPZOSA8MTT3 80 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 SMPD2O60906 423 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 ELLP55199 621 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 CASP6P55212 293 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 PPP1CBP62140 327 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 NKX6-1P78426 367 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 SLC38A11Q08AI6 406 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 DEFB127Q9H1M4 99 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 KCNIP1Q9NZI2 227 aa13.92□□□□□ -0.18
SEMA3B-207ENST00000441915 UBE2L5PA0A1B0GUS4 154 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 CLDN1O95832 211 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 OR8G2PQ6IF36 304 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 OR10D4PQ8NGN7 298 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 MISP3Q96FF7 219 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 IGHV3-64DA0A0J9YX35 117 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 A0A1W2PNU3 283 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 SEC14L6B5MCN3 397 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 TSTD3H0UI37 97 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 RND2P52198 227 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 TNFRSF9Q07011 255 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 GAMTQ14353 236 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 DNLZQ5SXM8 178 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 SPNS3Q6ZMD2 512 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 ZNF645Q8N7E2 425 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 CDH20Q9HBT6 801 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
SEMA3B-207ENST00000441915 CELA3BP08861 270 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 MPLP40238 635 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 MYPOPQ86VE0 399 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 MDS2Q8NDY4 140 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 LHX4Q969G2 390 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 WDYHV1Q96HA8 205 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 RBKSQ9H477 322 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 DIDO1Q9BTC0 2240 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 PPP1R2P9O14990 202 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 ZNF737O75373 536 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 GRPP07492 148 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 CD46P15529 392 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 IDH3GP51553 393 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 TMEM14EPQ6UXP3 125 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms