RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SPIN3Q5JUX0 258 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SSX3Q99909 188 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 PKIBQ9C010 78 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 NAA60Q9H7X0 242 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SH3BGRL2Q9UJC5 107 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 CADP27708 2225 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
LIMD1-202ENST00000440097 LRP5LA4QPB2 252 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SIRPB1O00241 398 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
LIMD1-202ENST00000440097 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF83P51522 516 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 C1orf185Q5T7R7 199 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 CYB561D1Q8N8Q1 229 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 OR14J1Q9UGF5 321 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 FAM215AQ9Y5M1 114 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 IFNA10P01566 189 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 IL13RA2Q14627 380 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 SPACA3Q8IXA5 215 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 ABHD5Q8WTS1 349 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 FRZBQ92765 325 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.97□□□□□ -0.49
LIMD1-202ENST00000440097 IQCF6A8MYZ5 107 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 CGAP01215 116 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 PPYP01298 95 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 BMP5P22003 454 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 ATP6V0CP27449 155 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 EWSR1Q01844 656 aaKnown RBP eCLIP11.97□□□□□ -0.49
LIMD1-202ENST00000440097 DNLZQ5SXM8 178 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
LIMD1-202ENST00000440097 OR11L1Q8NGX0 322 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 IL1F10Q8WWZ1 152 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 TVP23CQ96ET8 276 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 SUCNR1Q9BXA5 334 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 Q9N2K0 584 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 DUSP13Q9UII6 198 aa11.97□□□□□ -0.49
LIMD1-202ENST00000440097 PROB1E7EW31 1015 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 M0R1B8 84 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 GLIPR1P48060 266 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 ICAM4Q14773 271 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 C4orf17Q53FE4 359 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 SYT3Q9BQG1 590 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 DECR2Q9NUI1 292 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 TRAV24A0A0B4J272 114 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 KIR2DS1A0A191URI9 304 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 KIR2DS4P43632 304 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 KIR2DS1Q14954 304 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF718Q3SXZ3 478 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 LINC00596Q86U02 117 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 MOB3AQ96BX8 217 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.49
LIMD1-202ENST00000440097 NIPSNAP3BQ9BS92 247 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 SIRT7Q9NRC8 400 aa11.96□□□□□ -0.49
LIMD1-202ENST00000440097 ZGRF1Q86YA3 2104 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 IGHV2OR16-5A0A0B4J2B6 119 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 FAM24AA6NFZ4 105 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.5
LIMD1-202ENST00000440097 NAPSAO96009 420 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 KRTCAP3Q53RY4 240 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 VHLLQ6RSH7 139 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 MEX3BQ6ZN04 569 aaKnown RBP11.96□□□□□ -0.5
LIMD1-202ENST00000440097 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 OR8G5Q8NG78 346 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 BOD1Q96IK1 185 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 KIAA1456Q9P272 454 aa11.96□□□□□ -0.5
LIMD1-202ENST00000440097 TRAV39A0A0B4J263 110 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
LIMD1-202ENST00000440097 CD81P60033 236 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 ZNF474Q6S9Z5 364 aaPredicted RBP11.95□□□□□ -0.5
LIMD1-202ENST00000440097 Q8IYB0 196 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 SLC25A31Q9H0C2 315 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 ICE1Q9Y2F5 2266 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 TRDCB7Z8K6 153 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
LIMD1-202ENST00000440097 OMGP23515 440 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 IL2RGP31785 369 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 C20orf204Q6ZNR8 217 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 FAM210BQ96KR6 192 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 ROS1P08922 2347 aa11.95□□□□□ -0.5
LIMD1-202ENST00000440097 MLNRO43193 412 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 OR2H2O95918 312 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
LIMD1-202ENST00000440097 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
LIMD1-202ENST00000440097 GNMTQ14749 295 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms