RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 IGHV3-7P01780 117 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 CEACAM1P13688 526 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 PMCHP20382 165 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 OR10J1P30954 320 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 RAC3P60763 192 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 SLC35B1P78383 322 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 H2BFWTQ7Z2G1 175 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 RFESDQ8TAC1 157 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 ABHD14BQ96IU4 210 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 MANBALQ9NQG1 85 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 MTCH1Q9NZJ7 389 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 TIMM8BQ9Y5J9 83 aaPredicted RBP7.72□□□□□ -1.17
COPB1-202ENST00000439561 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 TCF21O43680 179 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 CRYGSP22914 178 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 TFPI2P48307 235 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 ERVFC1-1P60608 527 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 TFF3Q07654 80 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 LRRC75BQ2VPJ9 315 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 SLC25A53Q5H9E4 307 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 KMT5CQ86Y97 462 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 FGFRL1Q8N441 504 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 ZIC4Q8N9L1 334 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 IFI44Q8TCB0 444 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 ANAPC16Q96DE5 110 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 OR2D2Q9H210 308 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 ZNF552Q9H707 407 aaPredicted RBP7.71□□□□□ -1.17
COPB1-202ENST00000439561 GPR35Q9HC97 309 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 CBY1Q9Y3M2 126 aa7.71□□□□□ -1.17
COPB1-202ENST00000439561 IGHV3-43A0A0B4J1X8 118 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1-6A0A0C4DH72 117 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 FAM166BA8MTA8 275 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 C17orf112F2Z3M2 114 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 IGHV3-43DP0DP04 118 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 CBLN1P23435 193 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 OTX1P32242 354 aaPredicted RBP7.71□□□□□ -1.18
COPB1-202ENST00000439561 GABRA2P47869 451 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 PCP4P48539 62 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 TPPP2P59282 170 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 ACSM6Q6P461 480 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 TMEM170AQ8WVE7 144 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 HEYLQ9NQ87 328 aaPredicted RBP7.71□□□□□ -1.18
COPB1-202ENST00000439561 LAMA1P25391 3075 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 CHD3Q12873 2000 aaKnown RBP7.71□□□□□ -1.18
COPB1-202ENST00000439561 FCN1O00602 326 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 ZIC3O60481 467 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 HPRT1P00492 218 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 PFN1P07737 140 aaKnown RBP7.71□□□□□ -1.18
COPB1-202ENST00000439561 C1QTNF9P0C862 333 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 CRISP2P16562 243 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 IL3RAP26951 378 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 PLGLB1Q02325 96 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 C20orf204Q6ZNR8 217 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 Q6ZPA2 131 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 ZDHHC16Q969W1 377 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 RBM14Q96PK6 669 aaKnown RBP7.71□□□□□ -1.18
COPB1-202ENST00000439561 TMEM147Q9BVK8 224 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 PLSCR2Q9NRY7 297 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 TMEM242Q9NWH2 141 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 OR6C3Q9NZP0 311 aa7.71□□□□□ -1.18
COPB1-202ENST00000439561 ICE1Q9Y2F5 2266 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 MKRN2OSH3BPM6 223 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 ZG16O60844 167 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 GCH1P30793 250 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 ATP5G3P48201 142 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 TCL1AP56279 114 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 SIGLECL1Q8N7X8 197 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 CPEB3Q8NE35 698 aaKnown RBP7.7□□□□□ -1.18
COPB1-202ENST00000439561 CDH20Q9HBT6 801 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 ZNF391Q9UJN7 358 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 ADAMTS9Q9P2N4 1935 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 A0A0G2JMM0 328 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 A0A1W2PPB8 328 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 A0A1W2PRS3 328 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 KIR3DP1A8MWS1 328 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1D-33P01593 117 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1-33P01594 117 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 FOLR3P41439 243 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 IER3P46695 156 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 CATR1Q13166 79 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 EDDM3AQ14507 147 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 TMEM183BQ1AE95 376 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 ZNF573Q86YE8 665 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
COPB1-202ENST00000439561 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 PSMG3Q9BT73 122 aaPredicted RBP7.7□□□□□ -1.18
COPB1-202ENST00000439561 DERL1Q9BUN8 251 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 RIMS4Q9H426 269 aaPredicted RBP7.7□□□□□ -1.18
COPB1-202ENST00000439561 RNF115Q9Y4L5 304 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 DOCK10Q96BY6 2186 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 LRP5LA4QPB2 252 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 RNF212BA8MTL3 300 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 A8MXE2 369 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 B4E171 279 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 AQP7O14520 342 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 RHBDL1O75783 438 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 NAPSAO96009 420 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 IGLV3-1P01715 115 aa7.7□□□□□ -1.18
COPB1-202ENST00000439561 COX5BP10606 129 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms