RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TMEM69Q5SWH9 247 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 C6orf141Q5SZD1 244 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 LEMD1Q68G75 181 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 OR5D18Q8NGL1 313 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 RP9Q8TA86 221 aaKnown RBP7.66□□□□□ -1.18
RTN4-211ENST00000438462 CCDC107Q8WV48 283 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 SULT4A1Q9BR01 284 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 TXLNGYQ9BZA5 131 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 GORASP2Q9H8Y8 452 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 MED20Q9H944 212 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 S4R3C0 116 aa7.66□□□□□ -1.18
RTN4-211ENST00000438462 TRBV5-7A0A0A0MS05 114 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 ORC5O43913 435 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 CCDC22O60826 627 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 RBBP9O75884 186 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 SPDEFO95238 335 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 SOX14O95416 240 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 KCNJ3P48549 501 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 MRPL19P49406 292 aaKnown RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 CMC4P56277 68 aaPredicted RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 MTCP1P56278 107 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 HTD2P86397 168 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 STX3Q13277 289 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 PTGES3Q15185 160 aaKnown RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 ZNF829Q3KNS6 432 aaPredicted RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 LPCAT4Q643R3 524 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 C8orf82Q6P1X6 216 aaPredicted RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 Q6ZSR3 168 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 CNIH3Q8TBE1 160 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 MRPS24Q96EL2 167 aaKnown RBP7.65□□□□□ -1.18
RTN4-211ENST00000438462 UFC1Q9Y3C8 167 aa7.65□□□□□ -1.18
RTN4-211ENST00000438462 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 OR5H14A6NHG9 310 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 H0YJW9 148 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 PROP1O75360 226 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 E2F6O75461 281 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 GALP22466 123 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 KDELR2P33947 212 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 HNRNPA3P51991 378 aaKnown RBP7.64□□□□□ -1.19
RTN4-211ENST00000438462 SLC25A30Q5SVS4 291 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 STEAP3Q658P3 488 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 STHQ8IWL8 128 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 NR1H4Q96RI1 486 aaPredicted RBP7.64□□□□□ -1.19
RTN4-211ENST00000438462 TTTY10Q9BZA0 68 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 PPCSQ9HAB8 311 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 WASHC3Q9Y3C0 194 aa7.64□□□□□ -1.19
RTN4-211ENST00000438462 IGHV3-35A0A0C4DH35 117 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 MPPED1O15442 326 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 ALKBH1Q13686 389 aaKnown RBP7.63□□□□□ -1.19
RTN4-211ENST00000438462 GNMTQ14749 295 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 ODF1Q14990 250 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 IFI44LQ53G44 452 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 BCL2L15Q5TBC7 163 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 FAM222AQ5U5X8 452 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 TSNAXQ99598 290 aaKnown RBP7.63□□□□□ -1.19
RTN4-211ENST00000438462 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 ENOPH1Q9UHY7 261 aa7.63□□□□□ -1.19
RTN4-211ENST00000438462 IGKV3-7A0A075B6H7 116 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 IGKV1-9A0A0C4DH69 117 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 PRR32B1ATL7 298 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 BIRC5O15392 142 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 REG1AP05451 166 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 SPP1P10451 314 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 AGKQ53H12 422 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 ELMOD2Q8IZ81 293 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 OR8D4Q8NGM9 314 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 RNF5Q99942 180 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 FUZQ9BT04 418 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 MAGT1Q9H0U3 335 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 NEK6Q9HC98 313 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 LAMP5Q9UJQ1 280 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 ENPP4Q9Y6X5 453 aa7.62□□□□□ -1.19
RTN4-211ENST00000438462 TLDC2A0PJX2 215 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 SPINT2O43291 252 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 SRSF10O75494 262 aaKnown RBP7.61□□□□□ -1.19
RTN4-211ENST00000438462 IGKV1-16P04430 117 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 CT45A6P0DMU7 189 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 CT45A5P0DMU8 189 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 CT45A7P0DMV0 189 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 CCL1P22362 96 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 NUDT2P50583 147 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 HCCSP53701 268 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 CLINT1Q14677 625 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 ODF4Q2M2E3 257 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 MORN2Q502X0 79 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 ERICH5Q6P6B1 374 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 TRPT1Q86TN4 253 aaKnown RBP7.61□□□□□ -1.19
RTN4-211ENST00000438462 GBGT1Q8N5D6 347 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 OTULINQ96BN8 352 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 DPCDQ9BVM2 203 aaPredicted RBP7.61□□□□□ -1.19
RTN4-211ENST00000438462 MROQ9BYG7 248 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 MOB1AQ9H8S9 216 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 RHOFQ9HBH0 211 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 ZNF581Q9P0T4 197 aa7.61□□□□□ -1.19
RTN4-211ENST00000438462 TEX48A0A1B0GUV7 120 aa7.6□□□□□ -1.19
RTN4-211ENST00000438462 SERPINA3P01011 423 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms