RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 KIR3DX1Q9H7L2 352 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 UCK1Q9HA47 277 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 TUBG2Q9NRH3 451 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 TAS2R5Q9NYW4 299 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 IFNKQ9P0W0 207 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 VAX2Q9UIW0 290 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 KLF12Q9Y4X4 402 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 LYSTQ99698 3801 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
HMGB1P31-201ENST00000437242 CSMD3Q7Z407 3707 aa1.4□□□□□ -2.18
HMGB1P31-201ENST00000437242 PLECQ15149 4684 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 NINQ8N4C6 2090 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 ARPC4-TTLL3A0A0A6YYG9 625 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRAV8-4A0A0B4J246 113 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRAV17A0A0B4J275 112 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGHV2OR16-5A0A0B4J2B6 119 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 C1orf232A0A0U1RR37 186 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 PVALEFA0A1B0GWK0 134 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM72A0PK05 275 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CEACAM18A8MTB9 384 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 DEFB108AA8MXU0 73 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 C16orf90A8MZG2 172 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 C9J4A7 227 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 E7EQ34 232 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 H7C2Y5 167 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 MFNGO00587 321 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TOX3O15405 576 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 GATCO43716 136 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CALUO43852 315 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 MFSD11O43934 449 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 POP7O75817 140 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR2B3O76000 313 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 LY6HO94772 140 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 ETHE1O95571 254 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 OTCP00480 354 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 P01737 135 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TPM3P06753 285 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 IL3RAP26951 378 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TEAD1P28347 426 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 PPP1R2P41236 205 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 SPINT3P49223 89 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 HCCSP53701 268 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CMC4P56277 68 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 MTPNP58546 118 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC35B1P78383 322 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 DCDP81605 110 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 DMTNQ08495 405 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CPTPQ5TA50 214 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 HHATQ5VTY9 493 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 RESP18Q5W5W9 173 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 KDM4DQ6B0I6 523 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 THOC7Q6I9Y2 204 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZNF550Q7Z398 422 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 UMODL1-AS1Q8N2C9 162 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM104Q8NE00 496 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 FBXO36Q8NEA4 188 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 BAALCQ8WXS3 180 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRIB3Q96RU7 358 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TSNAXQ99598 290 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 MARVELD1Q9BSK0 173 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 SNRNP25Q9BV90 132 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 TBL1XR1Q9BZK7 514 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM96AQ9H5X1 160 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 LZTFL1Q9NQ48 299 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 C3orf18Q9UK00 162 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC7A11Q9UPY5 501 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CFL2Q9Y281 166 aa1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 CHTOPQ9Y3Y2 248 aaKnown RBP1.4□□□□□ -2.19
HMGB1P31-201ENST00000437242 FRAS1Q86XX4 4008 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 NOTCH1P46531 2555 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 HUWE1Q7Z6Z7 4374 aaKnown RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRAV8-6A0A0B4J262 113 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 A0A1B0GX78 115 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 A0A1W2PPV4 95 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZNF860A6NHJ4 632 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 C4orf51C9J302 202 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 H0YC42 278 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 PSMD11O00231 422 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRAPPC6AO75865 159 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGLV7-43P04211 117 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 SERPINA7P05543 415 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 CRYGCP07315 174 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR5AL1P0C617 328 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 CPN2P22792 545 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 GNRHRP30968 328 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLCO1A2P46721 670 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 GALR1P47211 349 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 GDI2P50395 445 aaKnown RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 TPI1P60174 286 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 AP1S1P61966 158 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 SNRPFP62306 86 aaKnown RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 PAFAH1B2P68402 229 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 ELF3P78545 371 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 MEF2BQ02080 365 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 XRCC4Q13426 336 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 TOMM34Q15785 309 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 SP6Q3SY56 376 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 FBXL19-AS1Q494R0 122 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 CDNFQ49AH0 187 aa1.39□□□□□ -2.19
HMGB1P31-201ENST00000437242 C6orf52Q5T4I8 152 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms