RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SRP19P09132 144 aaKnown RBP15.59■□□□□ 0.09
CLK1-205ENST00000434813 OR8U8P0C7N1 319 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 METTL15P1P0C7V9 234 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 PTAFRP25105 342 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 ARL16Q0P5N6 197 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 ICAM4Q14773 271 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 SMIM21Q3B7S5 101 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 ZNF718Q3SXZ3 478 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 HAPLN4Q86UW8 402 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 C5orf30Q96GV9 206 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 IGHV1-18A0A0C4DH31 117 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 PPIHO43447 177 aaKnown RBP15.58■□□□□ 0.09
CLK1-205ENST00000434813 PTBP3O95758 552 aaKnown RBP15.58■□□□□ 0.09
CLK1-205ENST00000434813 GCH1P30793 250 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 FOXC1Q12948 553 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 HAGHQ16775 308 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 C1orf174Q8IYL3 243 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 ZFP82Q8N141 532 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 OR52L2PQ8NGH6 319 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 CLDND2Q8NHS1 167 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 SCGB1C1Q8TD33 95 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 C2CD4CQ8TF44 421 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 PARD6GQ9BYG4 376 aaPredicted RBP15.58■□□□□ 0.09
CLK1-205ENST00000434813 RNF150Q9ULK6 438 aa15.58■□□□□ 0.09
CLK1-205ENST00000434813 P0C879 139 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 GABRA2P47869 451 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 HOXA4Q00056 320 aaPredicted RBP15.58■□□□□ 0.08
CLK1-205ENST00000434813 CATR1Q13166 79 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 P2RY6Q15077 328 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 FAM169BQ8N8A8 192 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 NINJ1Q92982 152 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 ISOC2Q96AB3 205 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 ZNF71Q9NQZ8 489 aaPredicted RBP15.58■□□□□ 0.08
CLK1-205ENST00000434813 DKK4Q9UBT3 224 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 FZR1Q9UM11 496 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 PROCRQ9UNN8 238 aa15.58■□□□□ 0.08
CLK1-205ENST00000434813 A0A1W2PPH5 198 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 RAMP3O60896 148 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 CGAP01215 116 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 DAOP14920 347 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 FABP6P51161 128 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 UBE2KP61086 200 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 PAX5Q02548 391 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 LRRC75BQ2VPJ9 315 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 ZNF610Q8N9Z0 462 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 MRGPRDQ8TDS7 321 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 STARD4Q96DR4 205 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 RSG1Q9BU20 258 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 OPN3Q9H1Y3 402 aaPredicted RBP15.57■□□□□ 0.08
CLK1-205ENST00000434813 ESRP2Q9H6T0 727 aaKnown RBP15.57■□□□□ 0.08
CLK1-205ENST00000434813 MSL2Q9HCI7 577 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 HSPB7Q9UBY9 170 aa15.57■□□□□ 0.08
CLK1-205ENST00000434813 PUS1Q9Y606 427 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLK1-205ENST00000434813 OR5H1A6NKK0 313 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 C1orf196B1AJZ1 125 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 RPL30P62888 115 aaKnown RBP15.56■□□□□ 0.08
CLK1-205ENST00000434813 COL10A1Q03692 680 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 TNFRSF9Q07011 255 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 BHLHA15Q7RTS1 189 aaPredicted RBP15.56■□□□□ 0.08
CLK1-205ENST00000434813 LILRB2Q8N423 598 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 UFSP2Q9NUQ7 469 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 SPTBN2O15020 2390 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 MZT1Q08AG7 82 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 KHDC3LQ587J8 217 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 KRBOX4Q5JUW0 171 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 TMEM14EPQ6UXP3 125 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 TCTEX1D1Q8N7M0 179 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 LURAP1Q96LR2 239 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 TAAR6Q96RI8 345 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 METRNQ9UJH8 293 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 AKAP13Q12802 2813 aa15.56■□□□□ 0.08
CLK1-205ENST00000434813 URB1O60287 2271 aaKnown RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 LOC102723971A0A1B0GUV8 181 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 A0A1W2PPE2 198 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 MBD3L4A6NDZ8 208 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 MBD3L3A6NE82 208 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 MBD3L5A6NJ08 208 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 IFNA4P05014 189 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 SPANXN5Q5MJ07 72 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 FAM53AQ6NSI3 398 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 ZNF808Q8N4W9 903 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 MBD3L2Q8NHZ7 208 aaPredicted RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 WDR61Q9GZS3 305 aaKnown RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 RPRMQ9NS64 109 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 GTF3C1Q12789 2109 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 H3BQ15 152 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 TFF1P04155 84 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 AGAP20933 346 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 RPL35P42766 123 aaKnown RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 AKR1D1P51857 326 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 RPS23P62266 143 aaKnown RBP15.55■□□□□ 0.08
CLK1-205ENST00000434813 SERF2P84101 59 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 TRAT1Q6PIZ9 186 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 CYB561D1Q8N8Q1 229 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 OR10G4Q8NGN3 311 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 OR13A1Q8NGR1 328 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 RBKSQ9H477 322 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 SLC25A15Q9Y619 301 aa15.55■□□□□ 0.08
CLK1-205ENST00000434813 RAB5AP20339 215 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms